Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126451920

Identifier: 126451920

GI number: 126451920

Start: 294753

End: 295424

Strand: Direct

Name: 126451920

Synonym: BURPS1106A_0320

Alternate gene names: NA

Gene position: 294753-295424 (Clockwise)

Preceding gene: 126453241

Following gene: 126452779

Centisome position: 7.39

GC content: 71.88

Gene sequence:

>672_bases
GTGCAAATATCGCGCAAGATCGCGGGCGCGCCGCGCTTGGCCGTCCGCGCCGCCCGCGCAGCCGGCGCCGGGGCGAGCGC
GCCGGCCGTACGCATCAACCGTCGAACCGCGCCGCGTTCGGGCGTTCGCGGCACCGATAACAAGACAAGAACGGAAACGG
AGGTCGATATGTTCCAGATGCTGCCGTCGATGACGTTCGGCCGCCGCCTGTCGGTGTGGTGGTCCTGCATGTGGCGCCAG
ACGCTCGCCAGCGCGCCGGTATGGATACTCGGCGTCGCGATCGTCGGATTGTCGATATCGCGAACCCACTCTGCCGCCGG
TCGGCCGCCGAGCGGCGGCGCGGCGGCGCTCGCCGTCGCGACCTTCTTCGTCTGCCTCGTCGTTTGCCTGCCGATCGCCG
GCTACATGGTGCGCGGCGGCTTCGCCGCGCACGCGTTGACGGCGCCCGAGCGGCTGGCGTTTCGGCAGGCGCTGATGGTG
GGGCTGACGACGTTCGGCTGGGCCGTGCTGGCCGCGCTGCCGATCAGCGTGGCGACGATGCCGCTGCGCCATGCCGGCTA
TCCGCTTGCCGGCCAGGCGATCGGCTGGGTGCTGAACGTCGCGGCCGGCCTGTACATCGTACTGCCGCGGCAGGCGCGGC
GGCTGCGGCTGCTCGCGGGCGAAGCCGCGTGA

Upstream 100 bases:

>100_bases
GTGCGCGCGGTGCCCGGTCCACGCCGGCGCGAGCCGGACGGCCGACACGAAGGAGGAGGACGCCCGCGCCGCAAGCGCGC
GGGCGGCGCGCCGCAAAAGC

Downstream 100 bases:

>100_bases
CGCCGCGTGCGCCGCAGCGCGCGCGCGGCTCGTTGCCGTGCATGCGCGGGCCGCACGGCGCATCGATGCATCGACGAAGG
GGGGAGCGAATGAACCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ
TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV
GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA

Sequences:

>Translated_223_residues
MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ
TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV
GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
>Mature_223_residues
MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ
TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV
GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23555; Mature: 23555

Theoretical pI: Translated: 12.39; Mature: 12.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQM
CCCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LPSMTFGRRLSVWWSCMWRQTLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVA
HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMVGLTTFGWAVLAALPISVATM
HHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
HHHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC
>Mature Secondary Structure
MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQM
CCCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LPSMTFGRRLSVWWSCMWRQTLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVA
HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMVGLTTFGWAVLAALPISVATM
HHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
HHHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA