| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451920
Identifier: 126451920
GI number: 126451920
Start: 294753
End: 295424
Strand: Direct
Name: 126451920
Synonym: BURPS1106A_0320
Alternate gene names: NA
Gene position: 294753-295424 (Clockwise)
Preceding gene: 126453241
Following gene: 126452779
Centisome position: 7.39
GC content: 71.88
Gene sequence:
>672_bases GTGCAAATATCGCGCAAGATCGCGGGCGCGCCGCGCTTGGCCGTCCGCGCCGCCCGCGCAGCCGGCGCCGGGGCGAGCGC GCCGGCCGTACGCATCAACCGTCGAACCGCGCCGCGTTCGGGCGTTCGCGGCACCGATAACAAGACAAGAACGGAAACGG AGGTCGATATGTTCCAGATGCTGCCGTCGATGACGTTCGGCCGCCGCCTGTCGGTGTGGTGGTCCTGCATGTGGCGCCAG ACGCTCGCCAGCGCGCCGGTATGGATACTCGGCGTCGCGATCGTCGGATTGTCGATATCGCGAACCCACTCTGCCGCCGG TCGGCCGCCGAGCGGCGGCGCGGCGGCGCTCGCCGTCGCGACCTTCTTCGTCTGCCTCGTCGTTTGCCTGCCGATCGCCG GCTACATGGTGCGCGGCGGCTTCGCCGCGCACGCGTTGACGGCGCCCGAGCGGCTGGCGTTTCGGCAGGCGCTGATGGTG GGGCTGACGACGTTCGGCTGGGCCGTGCTGGCCGCGCTGCCGATCAGCGTGGCGACGATGCCGCTGCGCCATGCCGGCTA TCCGCTTGCCGGCCAGGCGATCGGCTGGGTGCTGAACGTCGCGGCCGGCCTGTACATCGTACTGCCGCGGCAGGCGCGGC GGCTGCGGCTGCTCGCGGGCGAAGCCGCGTGA
Upstream 100 bases:
>100_bases GTGCGCGCGGTGCCCGGTCCACGCCGGCGCGAGCCGGACGGCCGACACGAAGGAGGAGGACGCCCGCGCCGCAAGCGCGC GGGCGGCGCGCCGCAAAAGC
Downstream 100 bases:
>100_bases CGCCGCGTGCGCCGCAGCGCGCGCGCGGCTCGTTGCCGTGCATGCGCGGGCCGCACGGCGCATCGATGCATCGACGAAGG GGGGAGCGAATGAACCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
Sequences:
>Translated_223_residues MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA >Mature_223_residues MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQMLPSMTFGRRLSVWWSCMWRQ TLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVATFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMV GLTTFGWAVLAALPISVATMPLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23555; Mature: 23555
Theoretical pI: Translated: 12.39; Mature: 12.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQM CCCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LPSMTFGRRLSVWWSCMWRQTLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVA HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH TFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMVGLTTFGWAVLAALPISVATM HHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA HHHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC >Mature Secondary Structure MQISRKIAGAPRLAVRAARAAGAGASAPAVRINRRTAPRSGVRGTDNKTRTETEVDMFQM CCCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH LPSMTFGRRLSVWWSCMWRQTLASAPVWILGVAIVGLSISRTHSAAGRPPSGGAAALAVA HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH TFFVCLVVCLPIAGYMVRGGFAAHALTAPERLAFRQALMVGLTTFGWAVLAALPISVATM HHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRHAGYPLAGQAIGWVLNVAAGLYIVLPRQARRLRLLAGEAA HHHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA