| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451916
Identifier: 126451916
GI number: 126451916
Start: 3833746
End: 3834246
Strand: Reverse
Name: 126451916
Synonym: BURPS1106A_3926
Alternate gene names: NA
Gene position: 3834246-3833746 (Counterclockwise)
Preceding gene: 126452804
Following gene: 126454601
Centisome position: 96.13
GC content: 67.66
Gene sequence:
>501_bases ATGACGGCACGCGTGCAGCGCATCACCCCGTTTCTGTGGTTCGACGGCAATGCCGAGGAAGCGGCGACGTTCTACGTATC GGTGTTCGACAACGCGAGGCTCACGCGCGTCGCCCGCTACGGCAAGGAAGGCGCGCAGGCGTCCGGGCAGGGCGAGGGCG CCGTGATGACGGTCGCCTTCGAACTCGACGGCCAGAGCTTCGTCGCGCTGAACGGCGGCCCCGTGTTCCAGTTCAATCCG GCCGTGTCGTTCGTCGTCAATTGCGCGACGCAGGATGAAATCGATTACTACTGGGGCCGGCTGTCCGAAGGCGGCGACGC GAGCGCGCAGCAGTGCGGCTGGCTCCGGGATCGCTTCGGTCTGTCGTGGCAGATCGTGCCCGTGCAGTTGCCGGAGCTGC TGGCGGGCGACGATCCGGCGAAGGCGTCGCGCACGATGCAGGCGCTGATGCAGATGAAGAAGATCGACCTCGGCGCGCTG CGGCGGGCCGCGGCGGACTGA
Upstream 100 bases:
>100_bases TTGGTTTGGCATTCGACTATCGAAGCCGCAGAGCCGCGCGGTGCGAGCGCCTATCATCGTTAAGTTGCCCCGCCGGGGAA GGCGAGCGAGGAGAGACGTC
Downstream 100 bases:
>100_bases CCGGCCGGCGGATCAAGCGGCCTGCCCGGGGCGTTGCCGCTGGGCGGCCGGGCTGAGCGGCGGTTCGTTCGGCGCGCCGC TTCGCGGCAGCGCGGCTTTT
Product: 3-demethylubiquinone-9 3-methyltransferase family protein
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; PhnB Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTARVQRITPFLWFDGNAEEAATFYVSVFDNARLTRVARYGKEGAQASGQGEGAVMTVAFELDGQSFVALNGGPVFQFNP AVSFVVNCATQDEIDYYWGRLSEGGDASAQQCGWLRDRFGLSWQIVPVQLPELLAGDDPAKASRTMQALMQMKKIDLGAL RRAAAD
Sequences:
>Translated_166_residues MTARVQRITPFLWFDGNAEEAATFYVSVFDNARLTRVARYGKEGAQASGQGEGAVMTVAFELDGQSFVALNGGPVFQFNP AVSFVVNCATQDEIDYYWGRLSEGGDASAQQCGWLRDRFGLSWQIVPVQLPELLAGDDPAKASRTMQALMQMKKIDLGAL RRAAAD >Mature_165_residues TARVQRITPFLWFDGNAEEAATFYVSVFDNARLTRVARYGKEGAQASGQGEGAVMTVAFELDGQSFVALNGGPVFQFNPA VSFVVNCATQDEIDYYWGRLSEGGDASAQQCGWLRDRFGLSWQIVPVQLPELLAGDDPAKASRTMQALMQMKKIDLGALR RAAAD
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18135; Mature: 18003
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVQRITPFLWFDGNAEEAATFYVSVFDNARLTRVARYGKEGAQASGQGEGAVMTVAF CCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE ELDGQSFVALNGGPVFQFNPAVSFVVNCATQDEIDYYWGRLSEGGDASAQQCGWLRDRFG EECCCEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC LSWQIVPVQLPELLAGDDPAKASRTMQALMQMKKIDLGALRRAAAD CEEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure TARVQRITPFLWFDGNAEEAATFYVSVFDNARLTRVARYGKEGAQASGQGEGAVMTVAF CCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE ELDGQSFVALNGGPVFQFNPAVSFVVNCATQDEIDYYWGRLSEGGDASAQQCGWLRDRFG EECCCEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCC LSWQIVPVQLPELLAGDDPAKASRTMQALMQMKKIDLGALRRAAAD CEEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA