Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452804

Identifier: 126452804

GI number: 126452804

Start: 3834433

End: 3835737

Strand: Reverse

Name: 126452804

Synonym: BURPS1106A_3927

Alternate gene names: NA

Gene position: 3835737-3834433 (Counterclockwise)

Preceding gene: 126453527

Following gene: 126451916

Centisome position: 96.17

GC content: 69.35

Gene sequence:

>1305_bases
TTGCGCTTCCAACACACTCTGACTCGCTGGCTCGGCGCGCTGAGTCTCGCCGCAGCCACGGCCGCGCTCGTCGCCGCGTG
CGGCGGCGGCGGCGACGGCGGCTCGAACGCATCGGTAAACACCGGCACCGGCGGCGGCGACACGTCCGCGGGCGGCGGCT
CGAACGGCGGCACCGGCGGCACCGGCGGCTCGGGCAGCACGCCGCTCGCGTCGAACCAGGCGGCGATCACCGTCAGCACG
GGCGTCGCGACCATCATCAACATGCCGACCGTCAGCGTGACGATCTGCGCGCCCGGCACGTCCGCGTGCCAGACGATCGG
CAACGTGCTCGTCGACACCGCGTCGTACGGGCTGCGGATCGTCAACACCGCCGCGTCGGGCGTGCTCGGCAGCCTGCCCG
TGTCGAGCGTGAGCGGCGGCACGCTCACCGAGTGCGGCAAGTTCGTGACGAGCTACACGTGGGGCACCGTGCGCACCGCC
GACGTGAGGATCGCCGGCGAGCAGGCGAGTTCGCTGCCGATCCAGATCATCGGCGATCTGGGCTCCTCCGGCGTGCCGAG
CTCGTGCTCGAACGGCAACGCGCCGTCGAACACCGCGGCCGATCTCGGCGCGAACGGCATTCTCGGGATCGGGCCCGCGC
CGTACGACTGCGGCGCGAACTGCACGACGTCGACGCTCTACAGCAACTACTACGCGTGCCCGAACGGCAACACGAGCTGC
CAGGTCACGACGGTGCCGCTCGCGCAGCAGGTCGCCAACCCGGTGCCGCGCTTTGCGACCGACAACAACGGCGTGATCGT
CGCGATGAACCCGCCGGCGGGCGGCAGCGCGACGGGCACGCTGACGTTCGGGATCAACACCCAGTCGAACAACGCGTTGC
CGGCGGGCGTGACGAAGCTCACCTCGACGACCGCGGGCGACCTGACGGGCACGCTGCTCGGCCGTGCGATCACGACGGCG
TTCTTCGATACCGGCTCGAACGCGTACTTCTTCGATACGGGCGGCAGCACGGCGGTCTCGCTGCCCGTGTGCAGCAACAA
TTCGTCGTTCTACTGCCCGTCGAGCACGCAAACGACGACGGCCACCGTCGTCGGCCTGAACGGCGCGCAGGCCTCGCAGT
CGATCTCGATCGGCAACGCGAGCGCGCTGTTTTCGTCGTACAAATCGGCGGTGCCGAATCTCGGCGGCCCGTTCGGCAAC
ACGCGGGTGCTCGATTTCGGCTTGCCGCACTTTTTCGGCAAGACACTGTACTTCGGGATGGACCTGACTGGCAGCGGCGG
TGCGGCGCCGTATGTCGCGTTTTGA

Upstream 100 bases:

>100_bases
CACATGGGCTCGTATTCCGGTCAGGCATGGCTGCCGCAGGCGCTGCCGGCCGGCTTCTCCACCAACGACATTCAGTGATC
GCGCCGGGAGGGGACAGATC

Downstream 100 bases:

>100_bases
CGCGGCGCGCGCGGGCGTCCCGTTCGGGTGCTCGCGTGACGCGGATTGAGGGCCGAACGGGCGCGAGGAATCGCGCCCGT
TTAGCATTGGTTTGGCATTC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRFQHTLTRWLGALSLAAATAALVAACGGGGDGGSNASVNTGTGGGDTSAGGGSNGGTGGTGGSGSTPLASNQAAITVST
GVATIINMPTVSVTICAPGTSACQTIGNVLVDTASYGLRIVNTAASGVLGSLPVSSVSGGTLTECGKFVTSYTWGTVRTA
DVRIAGEQASSLPIQIIGDLGSSGVPSSCSNGNAPSNTAADLGANGILGIGPAPYDCGANCTTSTLYSNYYACPNGNTSC
QVTTVPLAQQVANPVPRFATDNNGVIVAMNPPAGGSATGTLTFGINTQSNNALPAGVTKLTSTTAGDLTGTLLGRAITTA
FFDTGSNAYFFDTGGSTAVSLPVCSNNSSFYCPSSTQTTTATVVGLNGAQASQSISIGNASALFSSYKSAVPNLGGPFGN
TRVLDFGLPHFFGKTLYFGMDLTGSGGAAPYVAF

Sequences:

>Translated_434_residues
MRFQHTLTRWLGALSLAAATAALVAACGGGGDGGSNASVNTGTGGGDTSAGGGSNGGTGGTGGSGSTPLASNQAAITVST
GVATIINMPTVSVTICAPGTSACQTIGNVLVDTASYGLRIVNTAASGVLGSLPVSSVSGGTLTECGKFVTSYTWGTVRTA
DVRIAGEQASSLPIQIIGDLGSSGVPSSCSNGNAPSNTAADLGANGILGIGPAPYDCGANCTTSTLYSNYYACPNGNTSC
QVTTVPLAQQVANPVPRFATDNNGVIVAMNPPAGGSATGTLTFGINTQSNNALPAGVTKLTSTTAGDLTGTLLGRAITTA
FFDTGSNAYFFDTGGSTAVSLPVCSNNSSFYCPSSTQTTTATVVGLNGAQASQSISIGNASALFSSYKSAVPNLGGPFGN
TRVLDFGLPHFFGKTLYFGMDLTGSGGAAPYVAF
>Mature_434_residues
MRFQHTLTRWLGALSLAAATAALVAACGGGGDGGSNASVNTGTGGGDTSAGGGSNGGTGGTGGSGSTPLASNQAAITVST
GVATIINMPTVSVTICAPGTSACQTIGNVLVDTASYGLRIVNTAASGVLGSLPVSSVSGGTLTECGKFVTSYTWGTVRTA
DVRIAGEQASSLPIQIIGDLGSSGVPSSCSNGNAPSNTAADLGANGILGIGPAPYDCGANCTTSTLYSNYYACPNGNTSC
QVTTVPLAQQVANPVPRFATDNNGVIVAMNPPAGGSATGTLTFGINTQSNNALPAGVTKLTSTTAGDLTGTLLGRAITTA
FFDTGSNAYFFDTGGSTAVSLPVCSNNSSFYCPSSTQTTTATVVGLNGAQASQSISIGNASALFSSYKSAVPNLGGPFGN
TRVLDFGLPHFFGKTLYFGMDLTGSGGAAPYVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42510; Mature: 42510

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQHTLTRWLGALSLAAATAALVAACGGGGDGGSNASVNTGTGGGDTSAGGGSNGGTGG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
TGGSGSTPLASNQAAITVSTGVATIINMPTVSVTICAPGTSACQTIGNVLVDTASYGLRI
CCCCCCCCCCCCCEEEEEECCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEE
VNTAASGVLGSLPVSSVSGGTLTECGKFVTSYTWGTVRTADVRIAGEQASSLPIQIIGDL
EEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECC
GSSGVPSSCSNGNAPSNTAADLGANGILGIGPAPYDCGANCTTSTLYSNYYACPNGNTSC
CCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCHHHHHHCEEECCCCCCEE
QVTTVPLAQQVANPVPRFATDNNGVIVAMNPPAGGSATGTLTFGINTQSNNALPAGVTKL
EEEECCHHHHHCCCCCCCEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHH
TSTTAGDLTGTLLGRAITTAFFDTGSNAYFFDTGGSTAVSLPVCSNNSSFYCPSSTQTTT
HCCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCEE
ATVVGLNGAQASQSISIGNASALFSSYKSAVPNLGGPFGNTRVLDFGLPHFFGKTLYFGM
EEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHCCEEEEEE
DLTGSGGAAPYVAF
EECCCCCCCCCCCC
>Mature Secondary Structure
MRFQHTLTRWLGALSLAAATAALVAACGGGGDGGSNASVNTGTGGGDTSAGGGSNGGTGG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
TGGSGSTPLASNQAAITVSTGVATIINMPTVSVTICAPGTSACQTIGNVLVDTASYGLRI
CCCCCCCCCCCCCEEEEEECCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEE
VNTAASGVLGSLPVSSVSGGTLTECGKFVTSYTWGTVRTADVRIAGEQASSLPIQIIGDL
EEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECC
GSSGVPSSCSNGNAPSNTAADLGANGILGIGPAPYDCGANCTTSTLYSNYYACPNGNTSC
CCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCHHHHHHCEEECCCCCCEE
QVTTVPLAQQVANPVPRFATDNNGVIVAMNPPAGGSATGTLTFGINTQSNNALPAGVTKL
EEEECCHHHHHCCCCCCCEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHH
TSTTAGDLTGTLLGRAITTAFFDTGSNAYFFDTGGSTAVSLPVCSNNSSFYCPSSTQTTT
HCCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCEE
ATVVGLNGAQASQSISIGNASALFSSYKSAVPNLGGPFGNTRVLDFGLPHFFGKTLYFGM
EEEEECCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHCCEEEEEE
DLTGSGGAAPYVAF
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA