| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451894
Identifier: 126451894
GI number: 126451894
Start: 2343248
End: 2344393
Strand: Reverse
Name: 126451894
Synonym: BURPS1106A_2372
Alternate gene names: NA
Gene position: 2344393-2343248 (Counterclockwise)
Preceding gene: 126452137
Following gene: 126455328
Centisome position: 58.78
GC content: 68.85
Gene sequence:
>1146_bases GTGGCGATCAGGGTGGGGACCCGGCAGGACATCGATGCGCTGCGCGACGTGCCGGCGGCGATCGTGCTCGACGAAGCCGC ATGGCCGCCGCTTGCGCCGCGCCGGCGTGATTTCGACGGCGTCACGCAGACGCCCGGCGCGGCGTCGCGCGAACTGAGCC TGTTCCTGCTGGATCTCTACGCGGTCGCGAGCCGTGCGTCGATCGGCGAATTCGAATGCCGCTTCTTTCAGCTGTTGTCG CGCTATCTGCCGTTCGACGCCGCCTGGACGGGCGTCGCGAATCACACGCCGGGCGGCCCCGTGATGCACAACAGCTATCT ATACCGGCTGCCGCACGCGTTCTTCACCGATTGGAAGCGCGTGCGCGATTGCGATCCGCTCGCGCATCGCACCTTGCATG GCGCATACGGCCGGGCGGCGATCCTGTCCGTCGTCGAGCCGGGGCTCGACGGGCGTTTTCGCGACTGGTGCGTCAAGTAC GGGCTCGCGCAACTGATGTGCGTGTGCACGCTCGATCGGCGCTTCGGACTCACGACGTTTTTGTCGATCTACCGGCACGC CCTGAATCGTCCGTTCACCGAAGAGGACGCGCGCCGCTACGAGGACGTGATTGCGCATCTGGCGGCCGCATTGACGATCA ATCGCGCCGCGCAACTCACGCGCCTGCGCAGCGAAGCGGCCGCGTCGACGGTGCGCGCGATCTGCGACAACTTCGGCGTG CTGCATCACGCGGATGCCGGCTTCGGCGCGGTGCTGCGCAGCGAATGGCCGGACTGGGCGGGTTCGCGGCTGCCGCCGGC GTTTGTCGAGCATCTGCGCCGCCGCGTGTCGCAGCCGTATTCGGGCGACGCGCTGTGCATGCGGTGCATGCCCGTCGCCG GCCTGTTCCAGCTCGAGGTGCGGCCCCGCTCGCTGCTCGATCGCCTGAGCCCGCGCGAGCTCGCGGCGATCCGCTATTAC GGCGAAGGGCGCTCGCACAAGGAAGTCGCGCAGCAGATGGAGATCGCGCCGGCGACCGTGCGCCACTATTTGCGCTGCGC GTATCGCAAGCTCGGGATGCACGACAAGAGCCAGATCGGCGGCGTGCTCGGCGAGCTCGATCGTGCCGCCGAGGGAGCCG GCGCGGCGCGCGACATCGACGGCTGA
Upstream 100 bases:
>100_bases CGGGCGGTTTTCAAAAAAGACCGGCGGCTATAATCGATCGCTCAACGAAGCGATCGAAGCGCGCAAGGCCGGCTGCGAGC GGGCAAGGGAGCGGTCAGTG
Downstream 100 bases:
>100_bases CGCGCGGTGCGCGCGGCCGGATGGTTGTGCATGCAACTATTTGGCTCTATGCTCGCGGCTTCATCGAACGAGGAGAAACG CATATGGATCGAGCACCGGT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAIRVGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLS RYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKY GLAQLMCVCTLDRRFGLTTFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRVSQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYY GEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG
Sequences:
>Translated_381_residues MAIRVGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLS RYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKY GLAQLMCVCTLDRRFGLTTFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRVSQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYY GEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG >Mature_380_residues AIRVGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLYAVASRASIGEFECRFFQLLSR YLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKRVRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYG LAQLMCVCTLDRRFGLTTFLSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGVL HHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRVSQPYSGDALCMRCMPVAGLFQLEVRPRSLLDRLSPRELAAIRYYG EGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIGGVLGELDRAAEGAGAARDIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42560; Mature: 42429
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRVGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLY CEECCCCHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVASRASIGEFECRFFQLLSRYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKR HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEECCHHHHCCHHHHHHHHH VRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYGLAQLMCVCTLDRRFGLTTF HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRVSQPYSGDALCMRCMPVAGLFQLEV EEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEC RPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIG CHHHHHHCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH GVLGELDRAAEGAGAARDIDG HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AIRVGTRQDIDALRDVPAAIVLDEAAWPPLAPRRRDFDGVTQTPGAASRELSLFLLDLY EECCCCHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH AVASRASIGEFECRFFQLLSRYLPFDAAWTGVANHTPGGPVMHNSYLYRLPHAFFTDWKR HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEECCHHHHCCHHHHHHHHH VRDCDPLAHRTLHGAYGRAAILSVVEPGLDGRFRDWCVKYGLAQLMCVCTLDRRFGLTTF HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LSIYRHALNRPFTEEDARRYEDVIAHLAAALTINRAAQLTRLRSEAAASTVRAICDNFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LHHADAGFGAVLRSEWPDWAGSRLPPAFVEHLRRRVSQPYSGDALCMRCMPVAGLFQLEV EEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEC RPRSLLDRLSPRELAAIRYYGEGRSHKEVAQQMEIAPATVRHYLRCAYRKLGMHDKSQIG CHHHHHHCCCHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH GVLGELDRAAEGAGAARDIDG HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA