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The map label for this gene is rfaQ [C]

Identifier: 126451848

GI number: 126451848

Start: 1191821

End: 1192966

Strand: Direct

Name: rfaQ [C]

Synonym: BURPS1106A_1209

Alternate gene names: 126451848

Gene position: 1191821-1192966 (Clockwise)

Preceding gene: 126453690

Following gene: 126455061

Centisome position: 29.88

GC content: 69.81

Gene sequence:

>1146_bases
ATGAGCAGACTCCACGGCCGGATCCACATCTTCTCGCGAGCGCTGCCGAGGCTTGTCCTCAAGCCGTTGCGGCGCAAGCC
CGCGCACCTGCGGCGCATTCTGATCGCGCATCACCTGCTGCTCGGCGATACGTTGCTGCTGACGCCGCTCGTCGCGAAGC
TGCGCGAGCAGCATCCGGATGCGCAGATCGTGCTGGCGTGCCCGAAGGCGATTGCGCCGCTCTACGCGAAGCGTCCGTTC
GGCGTCGATGCGTTGGCGTTCGACCCGCGCGACGGCGTATCGGTCAGGCGTCTGCTCGCGTCGGGGCCGTATGATCTCGG
CATCGTCGCGGGCGACAACCGCCACAGCTGGCTTGCGCTTGGCGCGGGCTGCCGCTGGATCGTCGCACATGCGGGGGATG
CGCCCGGATGGAAGAACTGGCCGGTCGACGAACTGGTGCCGTATCCGGAGGCGCCCGCCGCTTGGGCCGATTTCGCCGCG
GCGCTCGTCGACGGGCCCGCGCCGCGCCTGTATCGCCCGTCCGACTGGCCGGCGCCGCAGACAAGCGCACCGCTGCCCGC
CGCGTTGCGCGAGCGCCCCTACGTGGTGTTGCATCCGGGCGCGAGCACGGCAGTCAAGCGCTGGCCGTCCGAACGCTGGC
GCGAGCTCGCGAGCCTCATCGAGGCGCAAGGCTATCAGCCCGTCTGGAGCGGCGGGCCGAGCGAAGTCGAGTTCGTCGCG
CAGATCGGTCCCGATTCCGCGCAGCCGAATCTCGCCGGCCGGCTCGGGCTCGCCGATCTGTGGCACGTGCTTGCCGGTGC
ACGGGCGGTCGTGTGTCCGGATACCGGCATCGCGCATCTCGCGCGTCTCGTCGGCGTGCCCACCGTCGCGCTGTTCGGCC
CCGGCAATGCCGGCATTCACGGCGCGGGGCGCTATTGGCGGGATGCGCCGTTCATCGCGCTGACGATCGCGGACATGCCG
TGCCGCGACCAGCCGTCCATGTTCCGCCGCCATGTCGCATGGGTACGGCGCTGCGACCGGAGTGCGCAGACGTGCGTCGC
GTGGCGCGGCGATCATGCGGACTGCATGGGGCGTCTTTCAGTGGATGCGGTGCATCGTGCGCTGCAAAACGTTTTGGCGC
TTGCGCCGTCAAGTTCAAGCCGATGA

Upstream 100 bases:

>100_bases
TATGAATCGTGGAAATTCTGCATGACGAAACGGCTTTCGGCCGGCCTCCGGCGCATCGCATCTCAAAGTGACGGAATCGA
TCGGCCGTTGATCTAATCGA

Downstream 100 bases:

>100_bases
CGATAACGACATCGCGCGTCGAGCGCGTGCTTTGGATCGCCTGTCCCACGCTGATGTTCGGCGTGATGTTCGGGCACATG
AACGGCGTGGTCAACACGAC

Product: heptosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Transferase; Lipopolysaccharide Heptosyltransferase I; ADP-HeptoseLPS Heptosyltransferase; Family 9 Glycosyl Transferase; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; ADP-HeptoseLPS Heptosyltransferase-Like Protein; Heptosyltransferase Family Protein; Heptosyltransferase I; LPS Core Biosynthesis-Related Protein; Heptosyltransferase; ADP-Heptose-Lipooligosaccharide Heptosyltransferase II; ADP-Heptose-LPS Heptosyltransferase III; Lipopolysaccharide Heptosyltransferase III; Hydrolase; LPS Core Biosynthesis Protein; Glycosyl Transferase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSRLHGRIHIFSRALPRLVLKPLRRKPAHLRRILIAHHLLLGDTLLLTPLVAKLREQHPDAQIVLACPKAIAPLYAKRPF
GVDALAFDPRDGVSVRRLLASGPYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPGWKNWPVDELVPYPEAPAAWADFAA
ALVDGPAPRLYRPSDWPAPQTSAPLPAALRERPYVVLHPGASTAVKRWPSERWRELASLIEAQGYQPVWSGGPSEVEFVA
QIGPDSAQPNLAGRLGLADLWHVLAGARAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWRDAPFIALTIADMP
CRDQPSMFRRHVAWVRRCDRSAQTCVAWRGDHADCMGRLSVDAVHRALQNVLALAPSSSSR

Sequences:

>Translated_381_residues
MSRLHGRIHIFSRALPRLVLKPLRRKPAHLRRILIAHHLLLGDTLLLTPLVAKLREQHPDAQIVLACPKAIAPLYAKRPF
GVDALAFDPRDGVSVRRLLASGPYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPGWKNWPVDELVPYPEAPAAWADFAA
ALVDGPAPRLYRPSDWPAPQTSAPLPAALRERPYVVLHPGASTAVKRWPSERWRELASLIEAQGYQPVWSGGPSEVEFVA
QIGPDSAQPNLAGRLGLADLWHVLAGARAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWRDAPFIALTIADMP
CRDQPSMFRRHVAWVRRCDRSAQTCVAWRGDHADCMGRLSVDAVHRALQNVLALAPSSSSR
>Mature_380_residues
SRLHGRIHIFSRALPRLVLKPLRRKPAHLRRILIAHHLLLGDTLLLTPLVAKLREQHPDAQIVLACPKAIAPLYAKRPFG
VDALAFDPRDGVSVRRLLASGPYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPGWKNWPVDELVPYPEAPAAWADFAAA
LVDGPAPRLYRPSDWPAPQTSAPLPAALRERPYVVLHPGASTAVKRWPSERWRELASLIEAQGYQPVWSGGPSEVEFVAQ
IGPDSAQPNLAGRLGLADLWHVLAGARAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWRDAPFIALTIADMPC
RDQPSMFRRHVAWVRRCDRSAQTCVAWRGDHADCMGRLSVDAVHRALQNVLALAPSSSSR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41475; Mature: 41344

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLHGRIHIFSRALPRLVLKPLRRKPAHLRRILIAHHLLLGDTLLLTPLVAKLREQHPD
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
AQIVLACPKAIAPLYAKRPFGVDALAFDPRDGVSVRRLLASGPYDLGIVAGDNRHSWLAL
CEEEEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEE
GAGCRWIVAHAGDAPGWKNWPVDELVPYPEAPAAWADFAAALVDGPAPRLYRPSDWPAPQ
CCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TSAPLPAALRERPYVVLHPGASTAVKRWPSERWRELASLIEAQGYQPVWSGGPSEVEFVA
CCCCCCHHHHHCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
QIGPDSAQPNLAGRLGLADLWHVLAGARAVVCPDTGIAHLARLVGVPTVALFGPGNAGIH
ECCCCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCEEEEECCCCCCCC
GAGRYWRDAPFIALTIADMPCRDQPSMFRRHVAWVRRCDRSAQTCVAWRGDHADCMGRLS
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHH
VDAVHRALQNVLALAPSSSSR
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SRLHGRIHIFSRALPRLVLKPLRRKPAHLRRILIAHHLLLGDTLLLTPLVAKLREQHPD
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
AQIVLACPKAIAPLYAKRPFGVDALAFDPRDGVSVRRLLASGPYDLGIVAGDNRHSWLAL
CEEEEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEE
GAGCRWIVAHAGDAPGWKNWPVDELVPYPEAPAAWADFAAALVDGPAPRLYRPSDWPAPQ
CCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TSAPLPAALRERPYVVLHPGASTAVKRWPSERWRELASLIEAQGYQPVWSGGPSEVEFVA
CCCCCCHHHHHCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
QIGPDSAQPNLAGRLGLADLWHVLAGARAVVCPDTGIAHLARLVGVPTVALFGPGNAGIH
ECCCCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCEEEEECCCCCCCC
GAGRYWRDAPFIALTIADMPCRDQPSMFRRHVAWVRRCDRSAQTCVAWRGDHADCMGRLS
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHH
VDAVHRALQNVLALAPSSSSR
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA