| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455061
Identifier: 126455061
GI number: 126455061
Start: 1192963
End: 1194261
Strand: Direct
Name: 126455061
Synonym: BURPS1106A_1210
Alternate gene names: NA
Gene position: 1192963-1194261 (Clockwise)
Preceding gene: 126451848
Following gene: 126454176
Centisome position: 29.91
GC content: 67.44
Gene sequence:
>1299_bases ATGACGATAACGACATCGCGCGTCGAGCGCGTGCTTTGGATCGCCTGTCCCACGCTGATGTTCGGCGTGATGTTCGGGCA CATGAACGGCGTGGTCAACACGACGCTCGCGTTGATCGGCGTCGGCACGCTTGCCGGCATCCTGTCCGCGAGCCGGCCGC CGTTCCGGCAATGGCCCCTCGTTTTGCCGATCGTCGTATGGGCTGCGTGGAGTCTCGCGTCGGTCGGCTGGTCGCTGTAT CCGCGTATCAGCCTGCGTGCGTGGTTCGACGAAGTGCTGTATCCGCTCGTCACGTTCTGGGGCTTCTGGCTGTTCGGCTC GCGCGTGAAGCGTCCCGAATGGCCGGTGCTCGTCGTGTGGGCCGCCTGCGTGCTGCTCGCGCTCCTGAGCGCGTTCTACT GGGGGCACTTGCAGCCGCCGACGCCGAATACTTTCCCGATTCGCTTCTATAACCGCGTGGGCCATACGAGTACGCTCGTG GTGTTCGCGATGCCGCTTTTCGCCACGCTGCTGCTGCGCGCCCGCTGGCGCGCGATCGGCGCGGTCGGGCTCGTCGCGTG CGGCTTCGTCGGGCTCGCGAGCCTGAACCGCTTTTTCTGGCCGGCGGCGGGTGCGACTCTCGTCGTCGCGTTCTACCCGC TCTATCGGCGCCGGCTCGGCGTGAGCATCGTCGCGATCGCGATCCTCGGCGCCACCGCGCTCGGGCTGCTCGAGTACAGC GCGCGCGAGCGCGATCTGTCCGCGTCCACCGCAACCGCGTCGGCGTCGTCGGCCGCGCGCGACATCACGGTCGCGGGCCA GAGGGTCTACGTGCCGGGCGAGTTGAATGCGCTCGGCGATACGCTGTCGTCCGATACGCGCCCGAAGCTCTGGGCGTTCT ATACCGAGCAGGGCAAGCAGCACGCGTGGCTCGGCGTCGGCTTCGGCAAGCCGCTGCCCGGACACGCGTACGCGGCCGAC GCACCGCCGCTCTTGTTGCAGATCGAGCCGCAAGCGCTCACGCACGCGCACAACCTGTTCCTCAACACGTGGTTGCAGAC GGGCTACATTGGCGTTGCGCTCGAAGCATTGCTGCTCGTCAGTCTCGCGGCGGCGTTCTGGCGGCTCAGACGCGACGTGC CCGCGGTGTCGGCGGCGGGGCTCGCGCTCGTCGTCGGGATGATCGCGAAGAACACGGTCGACGATTTCATGTGGCAAACG ACGATGCTCGCGTTCTGGTCGTTTGCGGGTTTCCTGCTCGGCTGCGGCGAACGCGACGCCTGCATGGCGCGCGTATCGCA GAACGCGGACGCACGATGA
Upstream 100 bases:
>100_bases GGCGCGGCGATCATGCGGACTGCATGGGGCGTCTTTCAGTGGATGCGGTGCATCGTGCGCTGCAAAACGTTTTGGCGCTT GCGCCGTCAAGTTCAAGCCG
Downstream 100 bases:
>100_bases CGCCGCCCGTCGCTCCGCCCGCTTTCACCGCGCAGCCCGCCGAGACGGCGGCGGACGTTGCCCGCCCGGGCGTGCGGCGC GTGCGCATCCTTTTTCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTITTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAGILSASRPPFRQWPLVLPIVVWAAWSLASVGWSLY PRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPVLVVWAACVLLALLSAFYWGHLQPPTPNTFPIRFYNRVGHTSTLV VFAMPLFATLLLRARWRAIGAVGLVACGFVGLASLNRFFWPAAGATLVVAFYPLYRRRLGVSIVAIAILGATALGLLEYS ARERDLSASTATASASSAARDITVAGQRVYVPGELNALGDTLSSDTRPKLWAFYTEQGKQHAWLGVGFGKPLPGHAYAAD APPLLLQIEPQALTHAHNLFLNTWLQTGYIGVALEALLLVSLAAAFWRLRRDVPAVSAAGLALVVGMIAKNTVDDFMWQT TMLAFWSFAGFLLGCGERDACMARVSQNADAR
Sequences:
>Translated_432_residues MTITTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAGILSASRPPFRQWPLVLPIVVWAAWSLASVGWSLY PRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPVLVVWAACVLLALLSAFYWGHLQPPTPNTFPIRFYNRVGHTSTLV VFAMPLFATLLLRARWRAIGAVGLVACGFVGLASLNRFFWPAAGATLVVAFYPLYRRRLGVSIVAIAILGATALGLLEYS ARERDLSASTATASASSAARDITVAGQRVYVPGELNALGDTLSSDTRPKLWAFYTEQGKQHAWLGVGFGKPLPGHAYAAD APPLLLQIEPQALTHAHNLFLNTWLQTGYIGVALEALLLVSLAAAFWRLRRDVPAVSAAGLALVVGMIAKNTVDDFMWQT TMLAFWSFAGFLLGCGERDACMARVSQNADAR >Mature_431_residues TITTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAGILSASRPPFRQWPLVLPIVVWAAWSLASVGWSLYP RISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPVLVVWAACVLLALLSAFYWGHLQPPTPNTFPIRFYNRVGHTSTLVV FAMPLFATLLLRARWRAIGAVGLVACGFVGLASLNRFFWPAAGATLVVAFYPLYRRRLGVSIVAIAILGATALGLLEYSA RERDLSASTATASASSAARDITVAGQRVYVPGELNALGDTLSSDTRPKLWAFYTEQGKQHAWLGVGFGKPLPGHAYAADA PPLLLQIEPQALTHAHNLFLNTWLQTGYIGVALEALLLVSLAAAFWRLRRDVPAVSAAGLALVVGMIAKNTVDDFMWQTT MLAFWSFAGFLLGCGERDACMARVSQNADAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47242; Mature: 47111
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAGILSASRPPFRQWPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCH VLPIVVWAAWSLASVGWSLYPRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPVLVVW HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AACVLLALLSAFYWGHLQPPTPNTFPIRFYNRVGHTSTLVVFAMPLFATLLLRARWRAIG HHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVGLVACGFVGLASLNRFFWPAAGATLVVAFYPLYRRRLGVSIVAIAILGATALGLLEYS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARERDLSASTATASASSAARDITVAGQRVYVPGELNALGDTLSSDTRPKLWAFYTEQGKQ HHHCCCCCCHHHCCHHHHHCEEEECCCEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCC HAWLGVGFGKPLPGHAYAADAPPLLLQIEPQALTHAHNLFLNTWLQTGYIGVALEALLLV EEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SLAAAFWRLRRDVPAVSAAGLALVVGMIAKNTVDDFMWQTTMLAFWSFAGFLLGCGERDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH CMARVSQNADAR HHHHHHCCCCCC >Mature Secondary Structure TITTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAGILSASRPPFRQWPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCH VLPIVVWAAWSLASVGWSLYPRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPVLVVW HHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AACVLLALLSAFYWGHLQPPTPNTFPIRFYNRVGHTSTLVVFAMPLFATLLLRARWRAIG HHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVGLVACGFVGLASLNRFFWPAAGATLVVAFYPLYRRRLGVSIVAIAILGATALGLLEYS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARERDLSASTATASASSAARDITVAGQRVYVPGELNALGDTLSSDTRPKLWAFYTEQGKQ HHHCCCCCCHHHCCHHHHHCEEEECCCEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCC HAWLGVGFGKPLPGHAYAADAPPLLLQIEPQALTHAHNLFLNTWLQTGYIGVALEALLLV EEEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SLAAAFWRLRRDVPAVSAAGLALVVGMIAKNTVDDFMWQTTMLAFWSFAGFLLGCGERDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH CMARVSQNADAR HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA