| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451683
Identifier: 126451683
GI number: 126451683
Start: 771661
End: 772503
Strand: Direct
Name: 126451683
Synonym: BURPS1106A_0787
Alternate gene names: NA
Gene position: 771661-772503 (Clockwise)
Preceding gene: 126453872
Following gene: 126455286
Centisome position: 19.35
GC content: 72.6
Gene sequence:
>843_bases ATGAAGACGCGCACGAATCGGCCCGGCGGCGGCGTGCTCGCGCGCGGGCGCTATGCCGGCTACGACGTGCTCGCGAAGCG CGACACGCCGTCATGGAACGATGCGACGCGGCGCGTGCTCGATGCGCGTCTCGCGCCACGCGAGGCGCCGCGCTATCTCG ACGCGCGGCAGTTCGCGACACTCGATGCGGTGTGCGCGCGCATCGTTGCGCAATCCGAGCCGCGCGACGCTCGGCAAGCC GATGCCGAAGCCGATGCAGCAGCCGAAGCTGAAGTTGAAACCGCAACCGAAGCCGCGGCCGCAGCCGAAACCGCGGCGAA CGAGGGCGCATCCACGCGCACGCCGATTCCGGTTGCCGCGCTGATCGACGAGCGCCTGCTTCACGATGAAGGCGACGGCT ACCGCGACGCGCGCATGCCGAGCTACCGCGAAGCGTGGCGCATCGGCCTCGCCGCGCTCGACGCGCACGCGCGGGCCGAG CACGGCCGGCCGTTCGCGTCGCTCGCCGGCGCCGAGCGTGACGCGATCCTGCGCGCGGCGCAGCGCGGCGCGCTCGATGG CCCCGCCTGGCGGGGGATGAGCTCGGCGCTCTTTTTCAGCAAGCGCGTGCTGAGCGACGTCGCGAGCGCGTACTACAGCC ATCCGCTCGCCTGGAACGAGATCGGCTTCGGCGGCCCGGCAAGCCCGCGCGGTTACGTGCGGATGGATTTCAACCGGCGC GACCCGTGGGAAGCGCCGCTCGCGGCGCGCGACGACGGCCGTGCCGATGCCGACGCCGACGCCGCTTCGCCGCGCCGCCT CGCGCAACCGGGAAAGCGCAAGGGGAACCGCGATGCCGATTGA
Upstream 100 bases:
>100_bases ACCTGCTCGCCGGGCCGCCGCTGCCCGCGCCGCCCGGCTTTTCGGCGCTCGCGCTCGCCGGGCTGTCGGCCGTGTCGCTC GCCGAACGGGAGGCGGGCGC
Downstream 100 bases:
>100_bases CGATCCGCACGCGGCGTTCGCGCGCGCGCGCGGCGCCGACGGCCGCGCGCCCGACGTGATGCGCGTCGGCGGCTGGGTGC CGATGCGCATGCACCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKTRTNRPGGGVLARGRYAGYDVLAKRDTPSWNDATRRVLDARLAPREAPRYLDARQFATLDAVCARIVAQSEPRDARQA DAEADAAAEAEVETATEAAAAAETAANEGASTRTPIPVAALIDERLLHDEGDGYRDARMPSYREAWRIGLAALDAHARAE HGRPFASLAGAERDAILRAAQRGALDGPAWRGMSSALFFSKRVLSDVASAYYSHPLAWNEIGFGGPASPRGYVRMDFNRR DPWEAPLAARDDGRADADADAASPRRLAQPGKRKGNRDAD
Sequences:
>Translated_280_residues MKTRTNRPGGGVLARGRYAGYDVLAKRDTPSWNDATRRVLDARLAPREAPRYLDARQFATLDAVCARIVAQSEPRDARQA DAEADAAAEAEVETATEAAAAAETAANEGASTRTPIPVAALIDERLLHDEGDGYRDARMPSYREAWRIGLAALDAHARAE HGRPFASLAGAERDAILRAAQRGALDGPAWRGMSSALFFSKRVLSDVASAYYSHPLAWNEIGFGGPASPRGYVRMDFNRR DPWEAPLAARDDGRADADADAASPRRLAQPGKRKGNRDAD >Mature_280_residues MKTRTNRPGGGVLARGRYAGYDVLAKRDTPSWNDATRRVLDARLAPREAPRYLDARQFATLDAVCARIVAQSEPRDARQA DAEADAAAEAEVETATEAAAAAETAANEGASTRTPIPVAALIDERLLHDEGDGYRDARMPSYREAWRIGLAALDAHARAE HGRPFASLAGAERDAILRAAQRGALDGPAWRGMSSALFFSKRVLSDVASAYYSHPLAWNEIGFGGPASPRGYVRMDFNRR DPWEAPLAARDDGRADADADAASPRRLAQPGKRKGNRDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30266; Mature: 30266
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRTNRPGGGVLARGRYAGYDVLAKRDTPSWNDATRRVLDARLAPREAPRYLDARQFAT CCCCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHCCHHHHHHHHHH LDAVCARIVAQSEPRDARQADAEADAAAEAEVETATEAAAAAETAANEGASTRTPIPVAA HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LIDERLLHDEGDGYRDARMPSYREAWRIGLAALDAHARAEHGRPFASLAGAERDAILRAA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH QRGALDGPAWRGMSSALFFSKRVLSDVASAYYSHPLAWNEIGFGGPASPRGYVRMDFNRR HHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC DPWEAPLAARDDGRADADADAASPRRLAQPGKRKGNRDAD CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MKTRTNRPGGGVLARGRYAGYDVLAKRDTPSWNDATRRVLDARLAPREAPRYLDARQFAT CCCCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHCCHHHHHHHHHH LDAVCARIVAQSEPRDARQADAEADAAAEAEVETATEAAAAAETAANEGASTRTPIPVAA HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LIDERLLHDEGDGYRDARMPSYREAWRIGLAALDAHARAEHGRPFASLAGAERDAILRAA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH QRGALDGPAWRGMSSALFFSKRVLSDVASAYYSHPLAWNEIGFGGPASPRGYVRMDFNRR HHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC DPWEAPLAARDDGRADADADAASPRRLAQPGKRKGNRDAD CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA