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The map label for this gene is yebA [C]

Identifier: 126451678

GI number: 126451678

Start: 1853216

End: 1854631

Strand: Reverse

Name: yebA [C]

Synonym: BURPS1106A_1900

Alternate gene names: 126451678

Gene position: 1854631-1853216 (Counterclockwise)

Preceding gene: 126453336

Following gene: 126454855

Centisome position: 46.5

GC content: 74.36

Gene sequence:

>1416_bases
TTGGCCAAGCCAATCGCGTACCCCGTTTCCGTTTCTTCCGCCCGCCGCGCCGAGCCGGCGCCCGCCGCCGAAGCGCCGGC
CCGCGGCGGCGCCCCTCATTCGTTCACGCGCAGGCTGCCCGCGGCGAGCGCGCTCGGCGCGCTGATCGCCTGCGGTCTCG
CCGCGCTGCCGGCCGTGTCGAAGTCGCCCGACGCGTCGAGCGCGAATGCCGCGCGCGCCCCGCAGCGCGTGTTCGCCGAC
GCGCCGTTTCCGAGCGCGCAGCGCTTCGTCACGGGCGAGCTCGAGCGCATGCTCGCCGAGCAGAACCCGCCCGCCGCGCC
GTTGCGCACGCTCGGCGCGCACGCCGAGGGCGCGACGCTCGGCGACGCGCCCTCGGACATCGCGCAGCACGGCCCGGCGC
GGCCGGCGCCCGCACGCCCCGCCGCGCCGCCGCCGGGGCTTTTCGCGCCGCTCGCCGAGCACCGCAACGCACTGCTCGGC
TACGACGGCCGCGCGTTCTCGCTCGCCGATTCGGTGCTCGCGCTCGTCGATAGCGGCGTGCGCGCCGGGCCGATCGACGA
CACGCTCGCCGACACGCTGAACCGGCTCGACATCCCGCCCGAAGTGCGCATCCAGATCGGCGACCTGATCGCCGAGCGCG
TGCGAGCGCATGCGCACGCGCAGCAAGGCGACCGCTACCGGATCGCGTTCGACGCCGCGTCGGGCAAGCCGCGCGTGACC
GCGCTCGAGCTGCGCGTCGCGGGCCGCCGGTTCGGCGCGATCTGGTTCAAGCCGCCGGGCGCGTCGAGCGGCGCGTACTA
CGCGTTCGACGGCGCGCCGCTCGACGCGCCGGCGCTCGCGATGCCCGTCGTCAGCACGCGCATCAGCTCGTACTTCGGCG
AGCGCGTGCATCCGCTGTCGCACATCCTGCAGATGCATACGGGCGTCGATCTCGCCGCGCCCACCGGCACGCGCGTGAAC
GCGGCGGCGGCGGGCGTCGTGTCGTTCGTCGGCTACGATCCGGGCGGCTACGGCAAGTATGTCGTCATCGACCATCCGGA
CCGCTCGTCGACCTACTACGCGCATCTGTCGGCGTTCGCGCCGAAGCTCGAGGTCGGGATGGCGGTCGCGCAGGGCCAGC
GGATCGGCGCGGTCGGCTCGACGGGCGCGGCGACGGGCCCGCATCTGCATTTCGAGGTGCGCGTCGACGATCAGCCGGTG
GATCCGCTCGTCGCGCTCGCGAACGCGCAGAACACGCTGTCGGCGATGCAGCTCGACGCGTTCCGGCGCGCCGCGAGCGA
GGCGCGCTTCCGGCTCGCGTCGGGCGCCACGCCGCCGCTCGGCTTCGCGCAGATCAACGCGCCGCTGTGGGCCGAGTTCG
CCACCGATACGTCGACGCTGCGCGCGATCTTCAACACGCATTACGCGACGTCGTGA

Upstream 100 bases:

>100_bases
TGAGCGCCCTGGCACTGCCGGCCCGCCCCGACGCGGGTTCCGACGCAGCCGCCGCCCCCCTTTTCCGTTCGAACCGCCCT
TTTCAAGGATGTGGACACCC

Downstream 100 bases:

>100_bases
CGGCGCGGTGACGCCGCGCCGCGTCCCGGACGCGAATCGTCCTATCGCGGCCCGCCCGCCGCCGGCTGCGCGGCGCTCGC
GCGCGTCGCATCGTCGCCGC

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MAKPIAYPVSVSSARRAEPAPAAEAPARGGAPHSFTRRLPAASALGALIACGLAALPAVSKSPDASSANAARAPQRVFAD
APFPSAQRFVTGELERMLAEQNPPAAPLRTLGAHAEGATLGDAPSDIAQHGPARPAPARPAAPPPGLFAPLAEHRNALLG
YDGRAFSLADSVLALVDSGVRAGPIDDTLADTLNRLDIPPEVRIQIGDLIAERVRAHAHAQQGDRYRIAFDAASGKPRVT
ALELRVAGRRFGAIWFKPPGASSGAYYAFDGAPLDAPALAMPVVSTRISSYFGERVHPLSHILQMHTGVDLAAPTGTRVN
AAAAGVVSFVGYDPGGYGKYVVIDHPDRSSTYYAHLSAFAPKLEVGMAVAQGQRIGAVGSTGAATGPHLHFEVRVDDQPV
DPLVALANAQNTLSAMQLDAFRRAASEARFRLASGATPPLGFAQINAPLWAEFATDTSTLRAIFNTHYATS

Sequences:

>Translated_471_residues
MAKPIAYPVSVSSARRAEPAPAAEAPARGGAPHSFTRRLPAASALGALIACGLAALPAVSKSPDASSANAARAPQRVFAD
APFPSAQRFVTGELERMLAEQNPPAAPLRTLGAHAEGATLGDAPSDIAQHGPARPAPARPAAPPPGLFAPLAEHRNALLG
YDGRAFSLADSVLALVDSGVRAGPIDDTLADTLNRLDIPPEVRIQIGDLIAERVRAHAHAQQGDRYRIAFDAASGKPRVT
ALELRVAGRRFGAIWFKPPGASSGAYYAFDGAPLDAPALAMPVVSTRISSYFGERVHPLSHILQMHTGVDLAAPTGTRVN
AAAAGVVSFVGYDPGGYGKYVVIDHPDRSSTYYAHLSAFAPKLEVGMAVAQGQRIGAVGSTGAATGPHLHFEVRVDDQPV
DPLVALANAQNTLSAMQLDAFRRAASEARFRLASGATPPLGFAQINAPLWAEFATDTSTLRAIFNTHYATS
>Mature_470_residues
AKPIAYPVSVSSARRAEPAPAAEAPARGGAPHSFTRRLPAASALGALIACGLAALPAVSKSPDASSANAARAPQRVFADA
PFPSAQRFVTGELERMLAEQNPPAAPLRTLGAHAEGATLGDAPSDIAQHGPARPAPARPAAPPPGLFAPLAEHRNALLGY
DGRAFSLADSVLALVDSGVRAGPIDDTLADTLNRLDIPPEVRIQIGDLIAERVRAHAHAQQGDRYRIAFDAASGKPRVTA
LELRVAGRRFGAIWFKPPGASSGAYYAFDGAPLDAPALAMPVVSTRISSYFGERVHPLSHILQMHTGVDLAAPTGTRVNA
AAAGVVSFVGYDPGGYGKYVVIDHPDRSSTYYAHLSAFAPKLEVGMAVAQGQRIGAVGSTGAATGPHLHFEVRVDDQPVD
PLVALANAQNTLSAMQLDAFRRAASEARFRLASGATPPLGFAQINAPLWAEFATDTSTLRAIFNTHYATS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=192, Percent_Identity=34.8958333333333, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082174, Length=111, Percent_Identity=37.8378378378378, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 49026; Mature: 48895

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPIAYPVSVSSARRAEPAPAAEAPARGGAPHSFTRRLPAASALGALIACGLAALPAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC
KSPDASSANAARAPQRVFADAPFPSAQRFVTGELERMLAEQNPPAAPLRTLGAHAEGATL
CCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
GDAPSDIAQHGPARPAPARPAAPPPGLFAPLAEHRNALLGYDGRAFSLADSVLALVDSGV
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCC
RAGPIDDTLADTLNRLDIPPEVRIQIGDLIAERVRAHAHAQQGDRYRIAFDAASGKPRVT
CCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
ALELRVAGRRFGAIWFKPPGASSGAYYAFDGAPLDAPALAMPVVSTRISSYFGERVHPLS
EEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HILQMHTGVDLAAPTGTRVNAAAAGVVSFVGYDPGGYGKYVVIDHPDRSSTYYAHLSAFA
HHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEHHHHC
PKLEVGMAVAQGQRIGAVGSTGAATGPHLHFEVRVDDQPVDPLVALANAQNTLSAMQLDA
CHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHH
FRRAASEARFRLASGATPPLGFAQINAPLWAEFATDTSTLRAIFNTHYATS
HHHHHHHHHEEHHCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKPIAYPVSVSSARRAEPAPAAEAPARGGAPHSFTRRLPAASALGALIACGLAALPAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC
KSPDASSANAARAPQRVFADAPFPSAQRFVTGELERMLAEQNPPAAPLRTLGAHAEGATL
CCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
GDAPSDIAQHGPARPAPARPAAPPPGLFAPLAEHRNALLGYDGRAFSLADSVLALVDSGV
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCC
RAGPIDDTLADTLNRLDIPPEVRIQIGDLIAERVRAHAHAQQGDRYRIAFDAASGKPRVT
CCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
ALELRVAGRRFGAIWFKPPGASSGAYYAFDGAPLDAPALAMPVVSTRISSYFGERVHPLS
EEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HILQMHTGVDLAAPTGTRVNAAAAGVVSFVGYDPGGYGKYVVIDHPDRSSTYYAHLSAFA
HHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEHHHHC
PKLEVGMAVAQGQRIGAVGSTGAATGPHLHFEVRVDDQPVDPLVALANAQNTLSAMQLDA
CHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHH
FRRAASEARFRLASGATPPLGFAQINAPLWAEFATDTSTLRAIFNTHYATS
HHHHHHHHHEEHHCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]