| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126454855
Identifier: 126454855
GI number: 126454855
Start: 1850173
End: 1850316
Strand: Reverse
Name: 126454855
Synonym: BURPS1106A_1893
Alternate gene names: NA
Gene position: 1850316-1850173 (Counterclockwise)
Preceding gene: 126451678
Following gene: 126452724
Centisome position: 46.39
GC content: 76.39
Gene sequence:
>144_bases GTGCCGCGACACGATCCGGCACGACACGACGCGGTGCGACGCGGCGCGAAGCATACGCGCGGCCCGCGCGTCGCGCGCAT GCGCGCGACGGCGGCCGGCGCGGACGTTCAGTATGCGAGGCGAGGCGCGACGTACGCGCCGTAG
Upstream 100 bases:
>100_bases GCCGCGAGTTCGTCACCGTATCAGTGCATGCACCGTTTTCGAACCAAGAAATGCTGCTGAACTCAGCAGTTTTCATGCTA TCGCGCGGCCAGGGCTGCAC
Downstream 100 bases:
>100_bases GCGGGCCCGATGCCGCTCGCGCTCGCGGGAATCTTGTAGCCGCCGACGAAGTGGCCGGTGATCGCCTTCAGGTTCGCGCC GTCCGACGCGTCGACGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MPRHDPARHDAVRRGAKHTRGPRVARMRATAAGADVQYARRGATYAP
Sequences:
>Translated_47_residues MPRHDPARHDAVRRGAKHTRGPRVARMRATAAGADVQYARRGATYAP >Mature_46_residues PRHDPARHDAVRRGAKHTRGPRVARMRATAAGADVQYARRGATYAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5181; Mature: 5050
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHDPARHDAVRRGAKHTRGPRVARMRATAAGADVQYARRGATYAP CCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCC >Mature Secondary Structure PRHDPARHDAVRRGAKHTRGPRVARMRATAAGADVQYARRGATYAP CCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA