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The map label for this gene is ybhR [C]

Identifier: 126451640

GI number: 126451640

Start: 2103668

End: 2104408

Strand: Reverse

Name: ybhR [C]

Synonym: BURPS1106A_2111

Alternate gene names: 126451640

Gene position: 2104408-2103668 (Counterclockwise)

Preceding gene: 126454296

Following gene: 126451648

Centisome position: 52.76

GC content: 71.12

Gene sequence:

>741_bases
ATGAGCGCCGTCGCCGCGATCGTCTGGTTCGACCTCAAGCGCTTCTGGGCGTCGCCGCTGCGCATCCTGTTCGGGCTCAC
GCAGCCGCTGCTGTATCTGTTCGTGCTCGGCGCGGCGCTCAGAAGCGGCACGTACGCGGAGATCGGCGGCTATCAGGCGT
ACATCTTTCCGGGCGTGGTCGGGCTGTCGCTGATGTTCACCGCGATCTCGGCCGCGGTCGGCATCGTGCACGATCGGCAA
ACGGGTTTGCTGAACGCGCTGCTCGTGTCGCCCGTGCGCCGCGTCGACATCGCGCTCGGCAAGATCGGCGCGGGCGCGCT
GCTCGCCTGGCTGCAGGCGCTGCTGTTGCTGCCGTTCTCGCCCGCGATCGGAATCGGGCTCACCGCGCCGCGCCTCGCGC
TGCTCGTCGCGGCGATGGCGTTCGCCGCGCTCGCGTTCTCGGCGCTCGGGCTCGCGCTCGCGCTGCCGTTCCGGTCGGTG
ATCGTGTTTCCCGTCGTGTCGAACACGCTGCTTCTGCCGATGTTCTTTCTGTCGGGCGGGCTCTACCCGCTCGATCTCGC
GCCGGACTGGATCCGCGCGGCGGCCGCATTCGACCCCGCCGCCTACGGCGTCGACCTGATGCGCGGCGTGCTGAGCGCGC
AGTACGCGATCGCGCCGTCGCGCTCGATCGCGGCGCTCGCCGCGTGCCTCGTCGTCGCGGGCACGCTCGTCGTGCGCGGC
GTGGGGCGGCAGCACGCGTAG

Upstream 100 bases:

>100_bases
GCGCCGATATCGCCGCGCCGGGGCTGAAGGATGTCGTCGGCCACTGGATCGCCGCGCGCCGCGGCGGCGACGCCGCGCCG
CGTTTCGCCGGGCGGCCCGC

Downstream 100 bases:

>100_bases
CGCGCGGCGGCGTGCGCGTCGCACGGGCGCGCGCGGACCCGGCGGGCGCCGTGGCGGTGTTTCCCCTCACTCAACCGTGG
CCCGCGCCGCGCCGTAAAGG

Product: ABC-2 type transporter, permease protein

Products: NA

Alternate protein names: Daunorubicin Resistance ABC Transporter Permease; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; ABC Multidrug Efflux Pump Inner Membrane Subunit; Daunorubicin Resistance Transmembrane Protein; ABC Transporter Permease Protein; Multidrug ABC Transporter Permease; ABC Transporter Protein

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVVGLSLMFTAISAAVGIVHDRQ
TGLLNALLVSPVRRVDIALGKIGAGALLAWLQALLLLPFSPAIGIGLTAPRLALLVAAMAFAALAFSALGLALALPFRSV
IVFPVVSNTLLLPMFFLSGGLYPLDLAPDWIRAAAAFDPAAYGVDLMRGVLSAQYAIAPSRSIAALAACLVVAGTLVVRG
VGRQHA

Sequences:

>Translated_246_residues
MSAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVVGLSLMFTAISAAVGIVHDRQ
TGLLNALLVSPVRRVDIALGKIGAGALLAWLQALLLLPFSPAIGIGLTAPRLALLVAAMAFAALAFSALGLALALPFRSV
IVFPVVSNTLLLPMFFLSGGLYPLDLAPDWIRAAAAFDPAAYGVDLMRGVLSAQYAIAPSRSIAALAACLVVAGTLVVRG
VGRQHA
>Mature_245_residues
SAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVVGLSLMFTAISAAVGIVHDRQT
GLLNALLVSPVRRVDIALGKIGAGALLAWLQALLLLPFSPAIGIGLTAPRLALLVAAMAFAALAFSALGLALALPFRSVI
VFPVVSNTLLLPMFFLSGGLYPLDLAPDWIRAAAAFDPAAYGVDLMRGVLSAQYAIAPSRSIAALAACLVVAGTLVVRGV
GRQHA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25702; Mature: 25571

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
SAVAAIVWFDLKRFWASPLRILFGLTQPLLYLFVLGAALRSGTYAEIGGYQAYIFPGVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEHHHHHH
GLSLMFTAISAAVGIVHDRQTGLLNALLVSPVRRVDIALGKIGAGALLAWLQALLLLPFS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PAIGIGLTAPRLALLVAAMAFAALAFSALGLALALPFRSVIVFPVVSNTLLLPMFFLSGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LYPLDLAPDWIRAAAAFDPAAYGVDLMRGVLSAQYAIAPSRSIAALAACLVVAGTLVVRG
CCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
VGRQHA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA