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The map label for this gene is tse [H]

Identifier: 126451648

GI number: 126451648

Start: 2101904

End: 2103493

Strand: Reverse

Name: tse [H]

Synonym: BURPS1106A_2110

Alternate gene names: 126451648

Gene position: 2103493-2101904 (Counterclockwise)

Preceding gene: 126451640

Following gene: 126452538

Centisome position: 52.74

GC content: 71.13

Gene sequence:

>1590_bases
ATGGATATTCGACGCAAGCTGCAGGTGTTTTCCCTGGTGACCGTCCTGTCGATGGGGGCGGGCGTGCTCGTGTGCGCGAC
GGGCCTGCGCGCGGCGATGAAGGCCGAAGACGCGTCGCACGAACGGGAACGGACGCTGCAGGGCATTACCGAGATCAAGG
CGAGCGCGCTGTCGACGATTCAGCTCGACCCGAGCACCGACGACACCAGGAAGATCTTCGCCGACGCCGAGCGCAATATC
GGCAAATGGTCGTCGACGCTCGCCGCGTCGCTGGCCGGCACGCCGCATGCGGCCCCGTTTCGCGCGCTCATCGCGCAATG
GGGCGACTACGACCGGCGCTCGCACGCGCTGTTCGATCTCGCCGCCCGCGATGCGAAAGCCGCGACCGATCGGACGACCG
CGCTCTACCACACCGATTTCGAGCCGTTCCAGCACGCGCTTGAGCAGATGGCGGGCGAGATGAACGCGCTCGCCGAGCAG
CAGAACGCCGAGGCGCGCGGCGTCGTCGATTCGGTGTTCGTCACCGTGCTGTCGGTGATGCTGGGCGGCATGGTGGTCGT
CTGCGCGATGATCTTCGCGCTCGCGCGCTCGCTGAACCGCGGCATTGCCGCGCTGCAGACGGCGATCGAGCGCATCGGCG
GCTCGCGCGATTTCACGTTGCGCGCGCCCGTTCGCGGCCGCGACGAACTCGCGCGCACCGCCGAGGCGTTCAATGCGCTG
ATCGAGCGTGTCGCCGCCGCGCTGCGCGAAGTATGGGCGGCCTCCGAATCGGCGAGCACGGCGACGCGCGAGATCGCCGC
GGGCAACGCCGATCTGTCCGCGCGCACCGAGACGCAGGCCGCGTCGCTCGAAGAGAGCGCCGCGAGCATGGCGCAGCTCA
CGGCCACGGTGTCGCAGAATGCCGAGAACGCGAAGGTCGCGAGCGAACTGGCGGGCAATGCGTCCGGGGTGGCGCATACG
GCGCGCGGCGTCGTCGAGGCGATGGTGGCGACGATGGCCGAGATCGGCCGGCATTCGTCGCGCATCGGCGAAATCACCGC
GCTGATCGACGGCATCGCGTTCCAGACCAACATCCTGGCGCTGAACGCGGCCGTCGAGGCCGCGCGCGCGGGCGAGCAGG
GCCGCGGCTTCGCCGTCGTGGCGGGCGAGGTGCGCGGGCTCGCGCAGCGCGCGGCCGATGCGGCCAGGGAGATCCGGAGC
CTGATCGACGCATCGGTCGCGACGGTCGGCGCGGGCGAATCGCAAGCCGAGCAGGTCCGGCGGACGATGGCCGAGCTCCA
GCAGGGGGCCGGAAAGGTGGCCGACGTCGTCGACGACATCTCGGCCGCGTCGGTCGAGCAGAGCCGCGGCATCGCGCAGG
TCGGCCAGGCGGTCGGCCACATGGACGAGGTCACGCAGCGAAACGCGGCGCTCGTCGAAGAACTGGCGGCCGCGTCGCAG
GCGATGGCGCAGCAGATGCAGGCGCTGCGCGACGCGGTGGGGATTTTCCGGATCGGCGGCCCGCCCGCGCAGCGGCGCGA
GTCTGACGATCCGGGGTGCGCCGCCGGCGCGCTCGGGGGGCGGGCGGCATTGACACCGGCCTTCGCGTAA

Upstream 100 bases:

>100_bases
CCGTGGCCCGCGCCGCGCCGTAAAGGCGAATGACGACGGGCGACGGGCCGCGCGGGGCGGCCGGCGCGCCGTCGCACGCC
ACCGGATTCGCGAGCAAGAC

Downstream 100 bases:

>100_bases
TCGCGACGGCGGCGGCGTGCGTTCGCCCGCGCGCACATAGGTCGAGGCGCGCCGCGGGCGTTCGGTCGGTCCGCGTTCGC
TCGGCAGGCACGGATCGAAG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MDIRRKLQVFSLVTVLSMGAGVLVCATGLRAAMKAEDASHERERTLQGITEIKASALSTIQLDPSTDDTRKIFADAERNI
GKWSSTLAASLAGTPHAAPFRALIAQWGDYDRRSHALFDLAARDAKAATDRTTALYHTDFEPFQHALEQMAGEMNALAEQ
QNAEARGVVDSVFVTVLSVMLGGMVVVCAMIFALARSLNRGIAALQTAIERIGGSRDFTLRAPVRGRDELARTAEAFNAL
IERVAAALREVWAASESASTATREIAAGNADLSARTETQAASLEESAASMAQLTATVSQNAENAKVASELAGNASGVAHT
ARGVVEAMVATMAEIGRHSSRIGEITALIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRGLAQRAADAAREIRS
LIDASVATVGAGESQAEQVRRTMAELQQGAGKVADVVDDISAASVEQSRGIAQVGQAVGHMDEVTQRNAALVEELAAASQ
AMAQQMQALRDAVGIFRIGGPPAQRRESDDPGCAAGALGGRAALTPAFA

Sequences:

>Translated_529_residues
MDIRRKLQVFSLVTVLSMGAGVLVCATGLRAAMKAEDASHERERTLQGITEIKASALSTIQLDPSTDDTRKIFADAERNI
GKWSSTLAASLAGTPHAAPFRALIAQWGDYDRRSHALFDLAARDAKAATDRTTALYHTDFEPFQHALEQMAGEMNALAEQ
QNAEARGVVDSVFVTVLSVMLGGMVVVCAMIFALARSLNRGIAALQTAIERIGGSRDFTLRAPVRGRDELARTAEAFNAL
IERVAAALREVWAASESASTATREIAAGNADLSARTETQAASLEESAASMAQLTATVSQNAENAKVASELAGNASGVAHT
ARGVVEAMVATMAEIGRHSSRIGEITALIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRGLAQRAADAAREIRS
LIDASVATVGAGESQAEQVRRTMAELQQGAGKVADVVDDISAASVEQSRGIAQVGQAVGHMDEVTQRNAALVEELAAASQ
AMAQQMQALRDAVGIFRIGGPPAQRRESDDPGCAAGALGGRAALTPAFA
>Mature_529_residues
MDIRRKLQVFSLVTVLSMGAGVLVCATGLRAAMKAEDASHERERTLQGITEIKASALSTIQLDPSTDDTRKIFADAERNI
GKWSSTLAASLAGTPHAAPFRALIAQWGDYDRRSHALFDLAARDAKAATDRTTALYHTDFEPFQHALEQMAGEMNALAEQ
QNAEARGVVDSVFVTVLSVMLGGMVVVCAMIFALARSLNRGIAALQTAIERIGGSRDFTLRAPVRGRDELARTAEAFNAL
IERVAAALREVWAASESASTATREIAAGNADLSARTETQAASLEESAASMAQLTATVSQNAENAKVASELAGNASGVAHT
ARGVVEAMVATMAEIGRHSSRIGEITALIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRGLAQRAADAAREIRS
LIDASVATVGAGESQAEQVRRTMAELQQGAGKVADVVDDISAASVEQSRGIAQVGQAVGHMDEVTQRNAALVEELAAASQ
AMAQQMQALRDAVGIFRIGGPPAQRRESDDPGCAAGALGGRAALTPAFA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=408, Percent_Identity=45.343137254902, Blast_Score=257, Evalue=2e-69,
Organism=Escherichia coli, GI1787690, Length=327, Percent_Identity=47.7064220183486, Blast_Score=248, Evalue=7e-67,
Organism=Escherichia coli, GI1788194, Length=383, Percent_Identity=43.3420365535248, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788195, Length=312, Percent_Identity=50, Blast_Score=244, Evalue=7e-66,
Organism=Escherichia coli, GI1789453, Length=345, Percent_Identity=36.5217391304348, Blast_Score=180, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55226; Mature: 55226

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRRKLQVFSLVTVLSMGAGVLVCATGLRAAMKAEDASHERERTLQGITEIKASALSTI
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QLDPSTDDTRKIFADAERNIGKWSSTLAASLAGTPHAAPFRALIAQWGDYDRRSHALFDL
EECCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
AARDAKAATDRTTALYHTDFEPFQHALEQMAGEMNALAEQQNAEARGVVDSVFVTVLSVM
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGGMVVVCAMIFALARSLNRGIAALQTAIERIGGSRDFTLRAPVRGRDELARTAEAFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH
IERVAAALREVWAASESASTATREIAAGNADLSARTETQAASLEESAASMAQLTATVSQN
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AENAKVASELAGNASGVAHTARGVVEAMVATMAEIGRHSSRIGEITALIDGIAFQTNILA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAAVEAARAGEQGRGFAVVAGEVRGLAQRAADAAREIRSLIDASVATVGAGESQAEQVR
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RTMAELQQGAGKVADVVDDISAASVEQSRGIAQVGQAVGHMDEVTQRNAALVEELAAASQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAQQMQALRDAVGIFRIGGPPAQRRESDDPGCAAGALGGRAALTPAFA
HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDIRRKLQVFSLVTVLSMGAGVLVCATGLRAAMKAEDASHERERTLQGITEIKASALSTI
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
QLDPSTDDTRKIFADAERNIGKWSSTLAASLAGTPHAAPFRALIAQWGDYDRRSHALFDL
EECCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
AARDAKAATDRTTALYHTDFEPFQHALEQMAGEMNALAEQQNAEARGVVDSVFVTVLSVM
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LGGMVVVCAMIFALARSLNRGIAALQTAIERIGGSRDFTLRAPVRGRDELARTAEAFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH
IERVAAALREVWAASESASTATREIAAGNADLSARTETQAASLEESAASMAQLTATVSQN
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AENAKVASELAGNASGVAHTARGVVEAMVATMAEIGRHSSRIGEITALIDGIAFQTNILA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAAVEAARAGEQGRGFAVVAGEVRGLAQRAADAAREIRSLIDASVATVGAGESQAEQVR
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RTMAELQQGAGKVADVVDDISAASVEQSRGIAQVGQAVGHMDEVTQRNAALVEELAAASQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAQQMQALRDAVGIFRIGGPPAQRRESDDPGCAAGALGGRAALTPAFA
HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]