| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451615
Identifier: 126451615
GI number: 126451615
Start: 325912
End: 326388
Strand: Direct
Name: 126451615
Synonym: BURPS1106A_0354
Alternate gene names: NA
Gene position: 325912-326388 (Clockwise)
Preceding gene: 126453785
Following gene: 126452502
Centisome position: 8.17
GC content: 77.36
Gene sequence:
>477_bases ATGATGACGGAACGGGCAATACGGAAGATCGGGCAGTGGGCGGCGGGCGTGACGTGCGCGCTCGCGGCGGTGCTCGTCTT CGCGCAGCCGCCGCACGGCGGCGGGCCCGGTTTCGGCGGCGGCCGCGGCGGCGTGCCCGCCATGGCGGGCGGCTGGCGCG GCGCGCCCGGCTATCTGCAGGCGGCGCCGCACGGCGGCGAGGCGCGGATCGGCGTGAACGGCTACCGTCAGCGCTGGGGG CTGCGCCCGACGCCGTCGTACGGCCGCTACGCGGCGCAAAGCCCGTACCGGCCGATCAGCGCCGAAGCGCGTCCGGCGCC GCATGCGTCCGGCCCGGGCAACGTGCCGATGCGCGCCGGCTCGATCCGCGCCGACGTCGCGCGCTACAACGAGGAGCGCG GCGGCCGCCCCGCGCCGGCGCCGCGGCAGGACGACTCTCAGCGCCTGCCGTTTTTCGCGCCGTTCTCGCGCAACTGA
Upstream 100 bases:
>100_bases TGCGCTCGACACGTTTTCGCCTCGCCCATAAATTACCGCTGAAAGGCGTGCGCGCGATTCAGGTGCGTGCGCGAGCAGAA AAGCAAGCGGCAGACCCATC
Downstream 100 bases:
>100_bases ATGCCGGGCCGGGCGGCGCGCACGCCGCCGGCTGATGCAAATTCGCGACACTCGCGCGAAATCCTGCCTCGCATTTCCTT GATTACGCTATCTTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MMTERAIRKIGQWAAGVTCALAAVLVFAQPPHGGGPGFGGGRGGVPAMAGGWRGAPGYLQAAPHGGEARIGVNGYRQRWG LRPTPSYGRYAAQSPYRPISAEARPAPHASGPGNVPMRAGSIRADVARYNEERGGRPAPAPRQDDSQRLPFFAPFSRN
Sequences:
>Translated_158_residues MMTERAIRKIGQWAAGVTCALAAVLVFAQPPHGGGPGFGGGRGGVPAMAGGWRGAPGYLQAAPHGGEARIGVNGYRQRWG LRPTPSYGRYAAQSPYRPISAEARPAPHASGPGNVPMRAGSIRADVARYNEERGGRPAPAPRQDDSQRLPFFAPFSRN >Mature_158_residues MMTERAIRKIGQWAAGVTCALAAVLVFAQPPHGGGPGFGGGRGGVPAMAGGWRGAPGYLQAAPHGGEARIGVNGYRQRWG LRPTPSYGRYAAQSPYRPISAEARPAPHASGPGNVPMRAGSIRADVARYNEERGGRPAPAPRQDDSQRLPFFAPFSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16615; Mature: 16615
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTERAIRKIGQWAAGVTCALAAVLVFAQPPHGGGPGFGGGRGGVPAMAGGWRGAPGYLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AAPHGGEARIGVNGYRQRWGLRPTPSYGRYAAQSPYRPISAEARPAPHASGPGNVPMRAG ECCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SIRADVARYNEERGGRPAPAPRQDDSQRLPFFAPFSRN CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MMTERAIRKIGQWAAGVTCALAAVLVFAQPPHGGGPGFGGGRGGVPAMAGGWRGAPGYLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AAPHGGEARIGVNGYRQRWGLRPTPSYGRYAAQSPYRPISAEARPAPHASGPGNVPMRAG ECCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SIRADVARYNEERGGRPAPAPRQDDSQRLPFFAPFSRN CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA