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The map label for this gene is omp32 [H]

Identifier: 126452502

GI number: 126452502

Start: 326796

End: 327872

Strand: Direct

Name: omp32 [H]

Synonym: BURPS1106A_0355

Alternate gene names: 126452502

Gene position: 326796-327872 (Clockwise)

Preceding gene: 126451615

Following gene: 126453831

Centisome position: 8.19

GC content: 65.46

Gene sequence:

>1077_bases
ATGAAGTCATCCTTCAGCCGCGCGCTGCAAACCACTTTCGCGTGCGCCGCCGTGGCGGCGCTGGCCGCCGGCGCTTCGGG
CGCGCGCGCGCAATCGAGCGTTCAGCTCTACGGGCAGGTCGACGAATGGATCGGCGCGCAGAAATTCCCCGGCGGGCAGC
GCGCGTGGGGCGTGCAGGGCGGCGGAATGTCGACGTCGTACTGGGGGCTGCGCGGCACCGAGGATCTCGGCGGCGGTTAT
CAGGCGATCTTCACGCTCGAGGATTTCTTCCGCGCGCAGAACGGCCATTACGGCCGCTTCGACGGCGACACGTTCTTCGG
CCGCAATGCGTATGTCGGACTCGCGACGCCTTACGGCACGGTGCGCGCCGGGCGCCTGACGACGCAGCTGTTCATCTCGA
CGATCCTCTTCAACCCGTTCATCGATTCGTATGTGTTCTCGCCGATGGTCTACCACGTGTTCCTCGGCCTCGGCACGTTC
CCGACGTATACGACCGATCAGGGCGTCGTCGGCGATTCGGGCTGGAACAACGCGATCGACTACACGAGCCCGAGCTTCGG
CGGCTTGAACGCGGCCGCGATGTACGCGCTCGGCAACACGGCGGGCGACAACCGCTCGAAGAAGTGGAGCGGCCAGCTGA
ACTATTCGAGCGGCCCGTTCGCGGCGACGGCCGTCTACCAGTACGTGAACTTCAACGGCGGCCCGGGCGATCTCGGCGCG
CTCGTGTCCGGCATGAAGAGCCAGGGCGTCGCGCAGCTCGGGCTGTCGTACGACTTCAAGCTTGCGAAGATCTACGCGCA
ATACATGTATACGAAGAACGAACTGAACACGGGAAGCTGGCACGTGAACACCGCGCAAGGCGGCGTATCGGTGCCGCTCG
GGCCGGGCAGCGCGCTCGCGTCGTATGCGTATTCGCGCGATTCGGGCGGGCACGACCAGACGCGTCGCACGTGGGCGCTC
GGCTACGATTATCCGCTGTCCAAGCGCACCGACGTGTATGCCGCGTACATGAACGACCGCTATTCGGGCATGTCGGGCGG
CGACACGTTCGGCGCGGGAATTCGTGCGAAGTTCTAA

Upstream 100 bases:

>100_bases
ATGGCTCGGGAAGATGGCGACGCCCCCGAACGGCATCGCGTCTTCCGGACGTCGGCCGCCCGTTCGCCTCGCATCCGTTA
GACGACAATCTGGAGATCAC

Downstream 100 bases:

>100_bases
CGAATTGGCGCCCGGGCGCGCACCGCCCGGGCGATGCACGAAAAAGTGAGCGGCGTCACATTCGGGGGCGCCGTTTTGCC
TTTTTTGACGTTTTCAATTC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSSFSRALQTTFACAAVAALAAGASGARAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFISTILFNPFIDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGLNAAAMYALGNTAGDNRSKKWSGQLNYSSGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQLGLSYDFKLAKIYAQYMYTKNELNTGSWHVNTAQGGVSVPLGPGSALASYAYSRDSGGHDQTRRTWAL
GYDYPLSKRTDVYAAYMNDRYSGMSGGDTFGAGIRAKF

Sequences:

>Translated_358_residues
MKSSFSRALQTTFACAAVAALAAGASGARAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFISTILFNPFIDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGLNAAAMYALGNTAGDNRSKKWSGQLNYSSGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQLGLSYDFKLAKIYAQYMYTKNELNTGSWHVNTAQGGVSVPLGPGSALASYAYSRDSGGHDQTRRTWAL
GYDYPLSKRTDVYAAYMNDRYSGMSGGDTFGAGIRAKF
>Mature_358_residues
MKSSFSRALQTTFACAAVAALAAGASGARAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQGGGMSTSYWGLRGTEDLGGGY
QAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGTVRAGRLTTQLFISTILFNPFIDSYVFSPMVYHVFLGLGTF
PTYTTDQGVVGDSGWNNAIDYTSPSFGGLNAAAMYALGNTAGDNRSKKWSGQLNYSSGPFAATAVYQYVNFNGGPGDLGA
LVSGMKSQGVAQLGLSYDFKLAKIYAQYMYTKNELNTGSWHVNTAQGGVSVPLGPGSALASYAYSRDSGGHDQTRRTWAL
GYDYPLSKRTDVYAAYMNDRYSGMSGGDTFGAGIRAKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38273; Mature: 38273

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSFSRALQTTFACAAVAALAAGASGARAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEECCCC
GGMSTSYWGLRGTEDLGGGYQAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGT
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC
VRAGRLTTQLFISTILFNPFIDSYVFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGLNAAAMYALGNTAGDNRSKKWSGQLNYSSGPFAATAVYQYVNFNGGPGDLGA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHH
LVSGMKSQGVAQLGLSYDFKLAKIYAQYMYTKNELNTGSWHVNTAQGGVSVPLGPGSALA
HHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHHH
SYAYSRDSGGHDQTRRTWALGYDYPLSKRTDVYAAYMNDRYSGMSGGDTFGAGIRAKF
HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKSSFSRALQTTFACAAVAALAAGASGARAQSSVQLYGQVDEWIGAQKFPGGQRAWGVQG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCEEECCCC
GGMSTSYWGLRGTEDLGGGYQAIFTLEDFFRAQNGHYGRFDGDTFFGRNAYVGLATPYGT
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC
VRAGRLTTQLFISTILFNPFIDSYVFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
YTSPSFGGLNAAAMYALGNTAGDNRSKKWSGQLNYSSGPFAATAVYQYVNFNGGPGDLGA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHH
LVSGMKSQGVAQLGLSYDFKLAKIYAQYMYTKNELNTGSWHVNTAQGGVSVPLGPGSALA
HHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHHH
SYAYSRDSGGHDQTRRTWALGYDYPLSKRTDVYAAYMNDRYSGMSGGDTFGAGIRAKF
HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]