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The map label for this gene is phaR

Identifier: 126451521

GI number: 126451521

Start: 2187930

End: 2188502

Strand: Reverse

Name: phaR

Synonym: BURPS1106A_2200

Alternate gene names: NA

Gene position: 2188502-2187930 (Counterclockwise)

Preceding gene: 126454082

Following gene: 126454903

Centisome position: 54.87

GC content: 54.97

Gene sequence:

>573_bases
ATGACTACTACAAAGAAAACTGGCGAACGGCTGATCAAGAAGTATCCGAACCGCCGTTTGTACGATACGGAGACGAGCAC
CTACATTACGTTGACCGACGTGAAGCAGCTCGTGCTGGAACAGGAGGATTTCAAGGTCATCGATGCGAAGAGCAGCGAAG
ACCTGACCCGCAGCATCCTGCTGCAGATCATTCTCGAAGAGGAGAGCGGCGGCGTGCCGATGTTCTCGTCTTCGATGCTC
TCGCAGATCATCCGGTTCTACGGGCATGCGATGCAGGGCATGATGGGCACGTATCTGGAGAAGAACATCCAGGCGTTCAT
CGACATCCAGAGCAAGCTCGCCGATCAGTCGAAGAACCTGTACGAGAACAACGCGATGAATCCGGAAGTCTGGTCGCAGT
TCATGAACATGCAGGCGCCGATGATGCAAGGGATGATGACGAGCTACATCGAGCAGTCGAAGAACATGTTCGTGCAGATG
CAGGAGCAGATGCAGAACCAGGCGAAGACCATGTTCAGTTCGTTCCCGTTCAAGCCGGCGACACCGCCGGGCAGCGAGCC
GGAGAAGAAGTAG

Upstream 100 bases:

>100_bases
TGGGTCGGATGTTCCGGGAACGCCCGGTGCCGCGCGCGGTCGCGCCCGCGTGCGGCGCCGGGCGCCGTCACTGCGCGCAT
CAGGCGCTCAAAGGCGTTAC

Downstream 100 bases:

>100_bases
GCACGGCGGCTTTCGCTACGCAACGGCCGCGGCGCGACCCGGCCGCGTTGCGATGCCGCGCGAGTCGTCGTGCCGCGAGC
TTCGGATTGCGGCTCGGCCC

Product: polyhydroxyalkanoate synthesis repressor PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTTTKKTGERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVIDAKSSEDLTRSILLQIILEEESGGVPMFSSSML
SQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLADQSKNLYENNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQM
QEQMQNQAKTMFSSFPFKPATPPGSEPEKK

Sequences:

>Translated_190_residues
MTTTKKTGERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVIDAKSSEDLTRSILLQIILEEESGGVPMFSSSML
SQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLADQSKNLYENNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQM
QEQMQNQAKTMFSSFPFKPATPPGSEPEKK
>Mature_189_residues
TTTKKTGERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVIDAKSSEDLTRSILLQIILEEESGGVPMFSSSMLS
QIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLADQSKNLYENNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQ
EQMQNQAKTMFSSFPFKPATPPGSEPEKK

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 21909; Mature: 21777

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTKKTGERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVIDAKSSEDLTRSIL
CCCCHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHHHHHHHCCCEEECCCCCHHHHHHHH
LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLADQSKNL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKTMFSSFPFKPA
HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPPGSEPEKK
CCCCCCCCCC
>Mature Secondary Structure 
TTTKKTGERLIKKYPNRRLYDTETSTYITLTDVKQLVLEQEDFKVIDAKSSEDLTRSIL
CCCHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHHHHHHHCCCEEECCCCCHHHHHHHH
LQIILEEESGGVPMFSSSMLSQIIRFYGHAMQGMMGTYLEKNIQAFIDIQSKLADQSKNL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENNAMNPEVWSQFMNMQAPMMQGMMTSYIEQSKNMFVQMQEQMQNQAKTMFSSFPFKPA
HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPPGSEPEKK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]