| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451452
Identifier: 126451452
GI number: 126451452
Start: 1207789
End: 1208505
Strand: Direct
Name: 126451452
Synonym: BURPS1106A_1229
Alternate gene names: NA
Gene position: 1207789-1208505 (Clockwise)
Preceding gene: 126454423
Following gene: 126454856
Centisome position: 30.28
GC content: 70.01
Gene sequence:
>717_bases GTGAAAAAATCGAAAGCGCTTTGGCGAACTGCATGGTTGTTGGCGATGATCGGCGTCGCGGTGGCGGGATGGCGATACGT GTCGCCGTCGCAGACCGCCGTCGCTCAGCCGCTGAAGCCCGGCGCGGCCTCGGACGAACGCGGCGGGCCGCCGGCGCGGG CGCGGACGGACGATGCGCCCGCGCAGGCAGGGCCCGCCGAGCGCAGGCTGGATCTCGTCGCGCTGCGCAAGAGCCTCGAG GGCCGCGACGACGCGCAGGCGCAAGTGCAGCGTATCGTTGCCTTCGCCCGCTTTCGCGACCGGATCGCCGCATACGGCGA AGGTCGAAACAGCATGCCCGCCGAAGAGCGGGCGCGGCTCGCCCGCGAGATCCTGGCGGAGTTGCCCGAGCACGTCGCGC GCAACGAAATCGTTCCCGTGCAGGCCGAGGCGCTCAGCGCCGCATTGCTCGCGGATGCGACGTCGGATTCCCGCACGCGC GACGCGGCCATCCAGTCGATGCGGCAACAGTGGGACGCCTATGCCGGGCGGACCGTGGGGCCGTCGCCCGCGAGCGATCC GCGCTATCTCGCTTACGCGCGGCAGAGCCGGGACATCGTCGCGCAGGTGCAGGCAAGAGTTCCCGATCCCGATCAGCAAC AGGCCGTCATCGCGCAGCGCCTGCAGGCGCTGCGCGTTCAACTGTTCGACCAGGCATCCCGATCCGATACCCGTTGA
Upstream 100 bases:
>100_bases GATCCCTTCTAGCGCGTGCTTTGACCGTGGGTATGTTTCGACATAGAACCTACACGAAAGCAAACGGTGAAGCGTCGCGA CGGCCCGACGAGGAGACGCC
Downstream 100 bases:
>100_bases GCGAACCGGCGTGCGCGTTGCCGTACGGGCGTGCGCGCCGCGGACAACCGATCCGATAGAAATGGAGGAGAGCATGCCCG TACGCGAATGTCTCGAATGT
Product: putative phospholipase C accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKKSKALWRTAWLLAMIGVAVAGWRYVSPSQTAVAQPLKPGAASDERGGPPARARTDDAPAQAGPAERRLDLVALRKSLE GRDDAQAQVQRIVAFARFRDRIAAYGEGRNSMPAEERARLAREILAELPEHVARNEIVPVQAEALSAALLADATSDSRTR DAAIQSMRQQWDAYAGRTVGPSPASDPRYLAYARQSRDIVAQVQARVPDPDQQQAVIAQRLQALRVQLFDQASRSDTR
Sequences:
>Translated_238_residues MKKSKALWRTAWLLAMIGVAVAGWRYVSPSQTAVAQPLKPGAASDERGGPPARARTDDAPAQAGPAERRLDLVALRKSLE GRDDAQAQVQRIVAFARFRDRIAAYGEGRNSMPAEERARLAREILAELPEHVARNEIVPVQAEALSAALLADATSDSRTR DAAIQSMRQQWDAYAGRTVGPSPASDPRYLAYARQSRDIVAQVQARVPDPDQQQAVIAQRLQALRVQLFDQASRSDTR >Mature_238_residues MKKSKALWRTAWLLAMIGVAVAGWRYVSPSQTAVAQPLKPGAASDERGGPPARARTDDAPAQAGPAERRLDLVALRKSLE GRDDAQAQVQRIVAFARFRDRIAAYGEGRNSMPAEERARLAREILAELPEHVARNEIVPVQAEALSAALLADATSDSRTR DAAIQSMRQQWDAYAGRTVGPSPASDPRYLAYARQSRDIVAQVQARVPDPDQQQAVIAQRLQALRVQLFDQASRSDTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26073; Mature: 26073
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSKALWRTAWLLAMIGVAVAGWRYVSPSQTAVAQPLKPGAASDERGGPPARARTDDAP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AQAGPAERRLDLVALRKSLEGRDDAQAQVQRIVAFARFRDRIAAYGEGRNSMPAEERARL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AREILAELPEHVARNEIVPVQAEALSAALLADATSDSRTRDAAIQSMRQQWDAYAGRTVG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PSPASDPRYLAYARQSRDIVAQVQARVPDPDQQQAVIAQRLQALRVQLFDQASRSDTR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKSKALWRTAWLLAMIGVAVAGWRYVSPSQTAVAQPLKPGAASDERGGPPARARTDDAP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AQAGPAERRLDLVALRKSLEGRDDAQAQVQRIVAFARFRDRIAAYGEGRNSMPAEERARL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AREILAELPEHVARNEIVPVQAEALSAALLADATSDSRTRDAAIQSMRQQWDAYAGRTVG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PSPASDPRYLAYARQSRDIVAQVQARVPDPDQQQAVIAQRLQALRVQLFDQASRSDTR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA