| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454856
Identifier: 126454856
GI number: 126454856
Start: 1208579
End: 1209964
Strand: Direct
Name: 126454856
Synonym: BURPS1106A_1230
Alternate gene names: NA
Gene position: 1208579-1209964 (Clockwise)
Preceding gene: 126451452
Following gene: 126453267
Centisome position: 30.3
GC content: 65.51
Gene sequence:
>1386_bases ATGCCCGTACGCGAATGTCTCGAATGTCTCAGGCGCCTGTGCGTCGCCGGCCTGCTGAGCGCGGCCGCCGCCGACGGCCA TGCGGCCGTCGCGGCCGCGCAGGACCCGTCGATTCCCTATTATTCGTGGTACGAAGTGACGCTGCCCGAAAGCAGCGGCG CGTCCTGCGGCAACGGCACGCCGATGCGTTTCTACATCAATCGCGCGCAGTCGGACAATCTGCTCTACATGATGGAGCCG GGCGGCGCGTGCTGGGATCACGGCACCTGCACCGAAACCGCGACCGGCGCGCAGGCGGGGCTCGGCGCGTTCAATCCCGA CGGTATTCCCCACAACTACGTGAACGGCACCGTGCAGCAGAGCCTGAAGACTTCGTTTCTGTCGCCGCTGATGACGCGGA TGGATCTCGCGCATATCCTCGTCGGCGAGCCGAAGGTGGAGACGCAGGAGTGGACGCAGGTGTTCGTCCCGTACTGCACG GGCGACATCCATATGGGCAGCGCGGTGCGCAGCTACGCGTCGCCGTCGGGCGACTGGCGGATTCAGCACTACAGCGGCCT GAAGAACGTTCGGGTGATCGCGCAGTGGCTCGTCGACCACGGGTTCGGCAAGCCGAGCCGGCTGCTCGTGTATGGAACGA GCGCGGGCGGTTACGGCACGCTCGGCAACTACGCGACGTTGCGCGGCACGTTGCAGCCGCAGTCGCACAGCTCGCTGCTC GACGATGCGGGCACCGTCTTCAATACGCGCTTCGGCGCCGATCCGGCGGCGTATCCGTCCGTCGGCCTGTACGACAAGGT GCGCGACGAATGGGGGATGACGGCGCCCGACGGCATGATCACGGTCAACAGCCGGCTGACCCGCTACTTCGATCCGGGCA ACATGGGCAGCGCGTATGCGGCGCTATCGGCGACCTATCCGCACGACCGCTTCGGCTATACGACGTACCGGCGCGACAGG ATCATCGCGGCCTACCATTACCGTCCCTTCGTGCCCGCGGTGATCGCGGCGCCGGACGACGCGACCAAGGACGCCCTGTC GCTCGCGATGTTCGACCGCGAACTGAGCGATCTGAAACAGGTGCTGAACCCGCTGCCGAACTTCGGCTATTTCATCCCGT GGGCGCGCGACGACTTCATGGGCAACCACCAGGTGACGGCGGTCAGCTTCACGGGCTCGGGCATTCACGAAAACGGCATC GACGCGGACGTCGGCACGTTCGTCGCCGATCTGCTCAATCAGCAGGACCCGGCGGACGTGCCCGTCATGAAAGCGTACCG GACCGAGCAATGGTCGGACTTCACGTTCTCGACCTTTCTTGCGTGGCTCGACAGCATCTTCAACCTGACCGGCGAAGCCG GGCCGATTTCGGGACATCGGTCCTGA
Upstream 100 bases:
>100_bases CAGGCATCCCGATCCGATACCCGTTGAGCGAACCGGCGTGCGCGTTGCCGTACGGGCGTGCGCGCCGCGGACAACCGATC CGATAGAAATGGAGGAGAGC
Downstream 100 bases:
>100_bases GCGCGCGGCACGCGTATTGCCGCCGCTTCATTGCTTCTCGGGCAGGAACCAGTTCATCACGAGCGCGCAGATGCCGCCCG TCGCGACGCCCGATTCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Pectinacetylesterase; Esterase
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MPVRECLECLRRLCVAGLLSAAAADGHAAVAAAQDPSIPYYSWYEVTLPESSGASCGNGTPMRFYINRAQSDNLLYMMEP GGACWDHGTCTETATGAQAGLGAFNPDGIPHNYVNGTVQQSLKTSFLSPLMTRMDLAHILVGEPKVETQEWTQVFVPYCT GDIHMGSAVRSYASPSGDWRIQHYSGLKNVRVIAQWLVDHGFGKPSRLLVYGTSAGGYGTLGNYATLRGTLQPQSHSSLL DDAGTVFNTRFGADPAAYPSVGLYDKVRDEWGMTAPDGMITVNSRLTRYFDPGNMGSAYAALSATYPHDRFGYTTYRRDR IIAAYHYRPFVPAVIAAPDDATKDALSLAMFDRELSDLKQVLNPLPNFGYFIPWARDDFMGNHQVTAVSFTGSGIHENGI DADVGTFVADLLNQQDPADVPVMKAYRTEQWSDFTFSTFLAWLDSIFNLTGEAGPISGHRS
Sequences:
>Translated_461_residues MPVRECLECLRRLCVAGLLSAAAADGHAAVAAAQDPSIPYYSWYEVTLPESSGASCGNGTPMRFYINRAQSDNLLYMMEP GGACWDHGTCTETATGAQAGLGAFNPDGIPHNYVNGTVQQSLKTSFLSPLMTRMDLAHILVGEPKVETQEWTQVFVPYCT GDIHMGSAVRSYASPSGDWRIQHYSGLKNVRVIAQWLVDHGFGKPSRLLVYGTSAGGYGTLGNYATLRGTLQPQSHSSLL DDAGTVFNTRFGADPAAYPSVGLYDKVRDEWGMTAPDGMITVNSRLTRYFDPGNMGSAYAALSATYPHDRFGYTTYRRDR IIAAYHYRPFVPAVIAAPDDATKDALSLAMFDRELSDLKQVLNPLPNFGYFIPWARDDFMGNHQVTAVSFTGSGIHENGI DADVGTFVADLLNQQDPADVPVMKAYRTEQWSDFTFSTFLAWLDSIFNLTGEAGPISGHRS >Mature_460_residues PVRECLECLRRLCVAGLLSAAAADGHAAVAAAQDPSIPYYSWYEVTLPESSGASCGNGTPMRFYINRAQSDNLLYMMEPG GACWDHGTCTETATGAQAGLGAFNPDGIPHNYVNGTVQQSLKTSFLSPLMTRMDLAHILVGEPKVETQEWTQVFVPYCTG DIHMGSAVRSYASPSGDWRIQHYSGLKNVRVIAQWLVDHGFGKPSRLLVYGTSAGGYGTLGNYATLRGTLQPQSHSSLLD DAGTVFNTRFGADPAAYPSVGLYDKVRDEWGMTAPDGMITVNSRLTRYFDPGNMGSAYAALSATYPHDRFGYTTYRRDRI IAAYHYRPFVPAVIAAPDDATKDALSLAMFDRELSDLKQVLNPLPNFGYFIPWARDDFMGNHQVTAVSFTGSGIHENGID ADVGTFVADLLNQQDPADVPVMKAYRTEQWSDFTFSTFLAWLDSIFNLTGEAGPISGHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50322; Mature: 50191
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRECLECLRRLCVAGLLSAAAADGHAAVAAAQDPSIPYYSWYEVTLPESSGASCGNGT CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCC PMRFYINRAQSDNLLYMMEPGGACWDHGTCTETATGAQAGLGAFNPDGIPHNYVNGTVQQ CEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHH SLKTSFLSPLMTRMDLAHILVGEPKVETQEWTQVFVPYCTGDIHMGSAVRSYASPSGDWR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCEECCHHHHHHCCCCCCEE IQHYSGLKNVRVIAQWLVDHGFGKPSRLLVYGTSAGGYGTLGNYATLRGTLQPQSHSSLL EEHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHH DDAGTVFNTRFGADPAAYPSVGLYDKVRDEWGMTAPDGMITVNSRLTRYFDPGNMGSAYA HCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCHHH ALSATYPHDRFGYTTYRRDRIIAAYHYRPFVPAVIAAPDDATKDALSLAMFDRELSDLKQ EEEECCCCCCCCCCEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH VLNPLPNFGYFIPWARDDFMGNHQVTAVSFTGSGIHENGIDADVGTFVADLLNQQDPADV HHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC PVMKAYRTEQWSDFTFSTFLAWLDSIFNLTGEAGPISGHRS CHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PVRECLECLRRLCVAGLLSAAAADGHAAVAAAQDPSIPYYSWYEVTLPESSGASCGNGT CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCC PMRFYINRAQSDNLLYMMEPGGACWDHGTCTETATGAQAGLGAFNPDGIPHNYVNGTVQQ CEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHH SLKTSFLSPLMTRMDLAHILVGEPKVETQEWTQVFVPYCTGDIHMGSAVRSYASPSGDWR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCEECCHHHHHHCCCCCCEE IQHYSGLKNVRVIAQWLVDHGFGKPSRLLVYGTSAGGYGTLGNYATLRGTLQPQSHSSLL EEHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHH DDAGTVFNTRFGADPAAYPSVGLYDKVRDEWGMTAPDGMITVNSRLTRYFDPGNMGSAYA HCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCHHH ALSATYPHDRFGYTTYRRDRIIAAYHYRPFVPAVIAAPDDATKDALSLAMFDRELSDLKQ EEEECCCCCCCCCCEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH VLNPLPNFGYFIPWARDDFMGNHQVTAVSFTGSGIHENGIDADVGTFVADLLNQQDPADV HHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC PVMKAYRTEQWSDFTFSTFLAWLDSIFNLTGEAGPISGHRS CHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA