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The map label for this gene is ylbK [H]

Identifier: 284159990

GI number: 284159990

Start: 917645

End: 919789

Strand: Reverse

Name: ylbK [H]

Synonym: BURPS668_A0939

Alternate gene names: 284159990

Gene position: 919789-917645 (Counterclockwise)

Preceding gene: 126442548

Following gene: 126442850

Centisome position: 29.41

GC content: 67.18

Gene sequence:

>2145_bases
GTGCTGTCGGGCGGCGGCGCGCGGGGCTACGCGCATCTGGGCGTGCTGAAGGTGCTGGAAGCGAACCGGATTCCGGTCGA
CTGCATCGCCGCGACGAGCATGGGCGCGGTCGTCGGCGGCCTGTACGCGACCGGCATGACCGCGCAGGACATGCAGCGGC
GGCTGTCGCAGGTGAACCTCGCCGACATCGCGTTCGACGTGACCGAGCGCTCGGACCTGCCGCAGAAGAAGCGCGAGGAC
GAACGCCTCTATATCGACAGCCTGACGATCGGCTTCGATTCGAAGGGCTTCAAGGCGCCCGTCGGGCTCGTGCAGGGCAA
CCGGCTGCAGGCGCTCCTCGCGAACTGGACGGCCGCCGTGCCGACGAACCAGCCGTTCGACCGGCTGCCGATCCCGTTCC
GAGCGATCGCGACCGATCTGCAGACCGGCCAGAAGGTGGTGCTCGATCACGGCTCGCTGCCGCTCGCGATCCGCGCGAGC
ATGGCGCTGCCGGGCCTGTTCTCGCCCGCCGAGATCGACGGCCGCGCGCTCGTGGACGGCGGGCTCGTCGGCAACCTGCC
CGTCGACGCCGCGCGCGCGATGGGCGCGGACGTCGTGATCGCGGTCGACATCGGCTCGCCGCTGCGCCCGCTGGACGCGC
TAGCGTCGCCCGCCGACGTGATGCAGCAGATGATCGGCATCCTGATCCGGCAGAACGTCGCCGAGCAGCGCAAGCAACTG
ACGGCGAACGACATCCTGCTGCAGCCGGACCTCGGCAAGCAGACGTTCACCGATTTTCAGAACGCGAACCAGGCGATCGC
CGCGGGCGAGGCCGCCGCCGTCGCCGCGCTGCCGCGGCTCGCGCGCTACGCGCTGTCGCCCGAGCAATACGAAGCGTATC
GGGCCGCCCACGCGCGCCCGCAGCAGCCGATCCGCATCACGTCGATCGAGATCCGCACCAACGGCGCGTCGGTGCCCAAG
CAGATCGTGCGCAACGCGCTGCGCGTGAAGCCGGGCGACGTCTACGATCCGCAGGCGGTCAGCGCCGATCTGCTGTCGCT
CACGACGAGCGGCAATTTCGAGAACGTCACGCAGCAGATCATCAACGAAGGCGACGAGCACCGGCTCGTGATCGACGCGC
AGGAGAAGTACTGGGGGCCGAACTTCCTGCTGTTCGGGCTGGGGATGTCGAGCAGTTCCACCGACGAAGGCGGCTTCCGG
CTGCATCTGGGCTACCGGCGGCCCTGGCTCACGCCGTCCGGCCTCGAATTCCGCGCGGATACGACGCTCGGCAGCGACAT
GCAGTCGGTGCACGTCGAGTTGCGCCAGCCGCTGTCGAACAAGACCGGCTACTACGTCGCGCCGTACGCGGACTACAAGC
GGCGGTTCGCGAACCTCTACAATGGGGAAAGCGACCTCAAGGTCACGCAATACCGGATCCAGACCTCACGTGCAGGGCTC
GATCTCGGGCTGCCGCTCGCGCGGCTCGGGGATTTCCGGATCGGCCTCGCCTATACGCACCTTTCGGCCGCCCCCTCATA
CAACCTCCTGCTGGACAGCTGGGTCGACGACGACGGCAACTCGCTGTTCTTCCCATCCTGGTACGCACGGCAGGTCAGCG
CGCGCGCCCGGCTCGTCATCGACCAGCTCGACGATCCGCTCTTCCCGCGCAAGGGCTACTTCGCGGAATTCCGCGCCGAA
CGCTCGCTCGCCACGAGCGAGGACAAGTTCACCGACGTCTACGGCAAGTTGATGGTCGCCGAGCGCTTCGGCCGGCACAG
CGTGAGCGCGAGCGTTGAGGCGGGCAAGAGCTTCGGTGGCGTGAATCTCAGCAATCCGTTCGACTACACGCTCGGCGGCT
TCCAGCATCTATCGGCGTACGCGGCCGACCAGTTGAGCGGCGATGCGCTTCTCTATGGACAGGTCACTTACATGAATCAG
CTGGCGACGTTCAATGCGTCTCCGATCAAGGCGCTCTACCTCGGCGCGAGCGCGGAAGTCGGTAATGTATGGTCGCTCGA
CCCGGCGTTTCCGAGCGGTCCGCTCAAGCAGAGCTACACGTTCTTCACCAGCCTGATCACATCGTTCGGGCCCGTGTACG
TCGGTATGGCGTTCGCACCCGGCGGGCGGCGCAACATCTACTTCCAGCTCGGCCGCACGTATTGA

Upstream 100 bases:

>100_bases
CGCTTCGGCGTCCACGGCAGCCGCGCCGACGCCGGCCGCGACGGACACCCTCGTTTGCACACCGGACGGCGGCGGCCGGC
ACCGGCCGGCGATCGGCCTC

Downstream 100 bases:

>100_bases
TCCGCGCACCGTGGATGGTGCCCTGGCGCCGCCGTTTCCGGACACGGCAAGTAACGGACGCTCGAGCGGGCGTCCGCATG
CAGCGAACTGATTCAACGAA

Product: patatin family phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFDVTERSDLPQKKRED
ERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRAS
MALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGILIRQNVAEQRKQL
TANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRITSIEIRTNGASVPK
QIVRNALRVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFR
LHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDLKVTQYRIQTSRAGL
DLGLPLARLGDFRIGLAYTHLSAAPSYNLLLDSWVDDDGNSLFFPSWYARQVSARARLVIDQLDDPLFPRKGYFAEFRAE
RSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFDYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQ
LATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIYFQLGRTY

Sequences:

>Translated_714_residues
MLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFDVTERSDLPQKKRED
ERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRAS
MALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGILIRQNVAEQRKQL
TANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRITSIEIRTNGASVPK
QIVRNALRVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFR
LHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDLKVTQYRIQTSRAGL
DLGLPLARLGDFRIGLAYTHLSAAPSYNLLLDSWVDDDGNSLFFPSWYARQVSARARLVIDQLDDPLFPRKGYFAEFRAE
RSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFDYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQ
LATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIYFQLGRTY
>Mature_714_residues
MLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNLADIAFDVTERSDLPQKKRED
ERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAVPTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRAS
MALPGLFSPAEIDGRALVDGGLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGILIRQNVAEQRKQL
TANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARPQQPIRITSIEIRTNGASVPK
QIVRNALRVKPGDVYDPQAVSADLLSLTTSGNFENVTQQIINEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFR
LHLGYRRPWLTPSGLEFRADTTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDLKVTQYRIQTSRAGL
DLGLPLARLGDFRIGLAYTHLSAAPSYNLLLDSWVDDDGNSLFFPSWYARQVSARARLVIDQLDDPLFPRKGYFAEFRAE
RSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGGVNLSNPFDYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQ
LATFNASPIKALYLGASAEVGNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIYFQLGRTY

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=213, Percent_Identity=36.6197183098592, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI148727290, Length=213, Percent_Identity=36.6197183098592, Blast_Score=108, Evalue=2e-23,
Organism=Escherichia coli, GI226510936, Length=311, Percent_Identity=28.2958199356913, Blast_Score=102, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 77747; Mature: 77747

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNL
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH
ADIAFDVTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAV
HHEEEECCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHCCEEEC
PTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRASMALPGLFSPAEIDGRALVDG
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEECC
GLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGILIRQNVAEQRKQL
CEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
TANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARP
CCCCEEECCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
QQPIRITSIEIRTNGASVPKQIVRNALRVKPGDVYDPQAVSADLLSLTTSGNFENVTQQI
CCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHCHHHHEEECCCCHHHHHHHH
INEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFRLHLGYRRPWLTPSGLEFRAD
HCCCCCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEC
TTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDLKVTQYRIQTSRAGL
CCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCC
DLGLPLARLGDFRIGLAYTHLSAAPSYNLLLDSWVDDDGNSLFFPSWYARQVSARARLVI
CCCCCHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHH
DQLDDPLFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGG
HHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
VNLSNPFDYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQLATFNASPIKALYLGASAEV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECCCCCC
GNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIYFQLGRTY
CCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCC
>Mature Secondary Structure
MLSGGGARGYAHLGVLKVLEANRIPVDCIAATSMGAVVGGLYATGMTAQDMQRRLSQVNL
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH
ADIAFDVTERSDLPQKKREDERLYIDSLTIGFDSKGFKAPVGLVQGNRLQALLANWTAAV
HHEEEECCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHCCEEEC
PTNQPFDRLPIPFRAIATDLQTGQKVVLDHGSLPLAIRASMALPGLFSPAEIDGRALVDG
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEECC
GLVGNLPVDAARAMGADVVIAVDIGSPLRPLDALASPADVMQQMIGILIRQNVAEQRKQL
CEECCCCHHHHHHCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
TANDILLQPDLGKQTFTDFQNANQAIAAGEAAAVAALPRLARYALSPEQYEAYRAAHARP
CCCCEEECCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
QQPIRITSIEIRTNGASVPKQIVRNALRVKPGDVYDPQAVSADLLSLTTSGNFENVTQQI
CCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHCHHHHEEECCCCHHHHHHHH
INEGDEHRLVIDAQEKYWGPNFLLFGLGMSSSSTDEGGFRLHLGYRRPWLTPSGLEFRAD
HCCCCCCEEEEECHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEC
TTLGSDMQSVHVELRQPLSNKTGYYVAPYADYKRRFANLYNGESDLKVTQYRIQTSRAGL
CCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCC
DLGLPLARLGDFRIGLAYTHLSAAPSYNLLLDSWVDDDGNSLFFPSWYARQVSARARLVI
CCCCCHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHH
DQLDDPLFPRKGYFAEFRAERSLATSEDKFTDVYGKLMVAERFGRHSVSASVEAGKSFGG
HHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
VNLSNPFDYTLGGFQHLSAYAADQLSGDALLYGQVTYMNQLATFNASPIKALYLGASAEV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECCCCCC
GNVWSLDPAFPSGPLKQSYTFFTSLITSFGPVYVGMAFAPGGRRNIYFQLGRTY
CCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]