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The map label for this gene is 126445536

Identifier: 126445536

GI number: 126445536

Start: 2181337

End: 2183019

Strand: Reverse

Name: 126445536

Synonym: BURPS668_A2250

Alternate gene names: NA

Gene position: 2183019-2181337 (Counterclockwise)

Preceding gene: 126444604

Following gene: 126445193

Centisome position: 69.8

GC content: 69.4

Gene sequence:

>1683_bases
ATGCGTTTCGTGCTTTCGCGCCGCCGCGCGCGCGGCTTCGCGCTGATCGAGATGCTCGGCGCGCTCGCGATCGCCGCGCT
GCTGCTCGCCGGCATCGCGGCGATGATGGACAGCTCGCTCGACGACGTGCGCGCGCAGCAGGCCGCGCAATACCAGGCGC
AGGTGACGGCCGCGGCCACGCGTGCGCTCAAGCGTGACTACGACGCATGGCTGCAGCGCGCGAACGCGCAGACGCCCGTC
GTGATGACGCTTGCCGATTTGCAGGCGACGAACGATCTGCCCGCCGCGCTACAGACGCGCAACGCGTACGGCCAGCACAC
GTGCGTGCTCGTCAAGCGCACCGCGAACGGCGTCGGACTCGACGCGCTCGTCGTGACGACGGGCGGCGAGGCGATCGGCG
ACAAGGAGCTCGGGCTCGTCGCCGCGAGCGCGGGGCCGGGCGGCGGCTCGATCGCCACGAGCGCGCCCGCGCTCGCGCGC
GGCGCGTTCGACGCGTGGCGCATGCCGCTCGGCGCCTACCTCGGCGGCAGCTCGCCGACGTGCGATCCGGCCGACGCCGC
GCCGCCGAACGCCGGCCATCTCGCCAACGAGATCTTCTTCAACGGGCCGGGCCAGCAGATCAACAGCGATTACCTGTACC
GCGTCGGCGTCGGCGGCCATCCGGAGGCGAACGCGATGCAGGTGCCGATCTGGCTCACGCACACGTTCGTCGAAGGCGCC
GCCGACGCGGCGAACTGCGGTGCGGCCGGCAGCTATGCGAACGGCAAGCTCGGCGCGGACGCGGCCGGACAGTTGCTGAG
CTGCAGGAACGGCGTGTGGCGTGGCGCCGGCGGTCACTGGAAGGACCCGGTCAGGACGGCCGACGATCTGCCCACCGACG
CATCGAACGAAACCGGCGACGTGCGCCTCACGCTCGACACGTTCCGCGCGTTCGCGTGGACGGGCAACGCGTGGCAGGCG
CTCGCCGTGGACCAGAACGGCAACATGATCGTGCCGGGCGTCGTCTCCGCGAACCAGTACGAGATCACCGGGCGCGTCGT
CGTCAACACGCCGTGCGCGCCGGAGCCGAGCCGGCCGAACGCGGGGCTCGTGTCGATGGGCCAGGACGGGCAGGTGCTGT
CGTGCCAGGGCGGCAAGTGGCTGCCGCAATCGGGGATCAAGATCGGCGGCACCGAAACGGCGTGCGAGATCCTGATGGAG
ACGCCCGGCGCGACGGATTTCTCGTGCGGGTACACCTACCGCGGCCCCTATCCGAATCCGCCGCTCATCACCTACGAGCC
CGACGGCACGTACACGTACACGATCAACCGGCCGGTGAAGCTCGACAACAACGGGCTCATCGCGGTGAGCGCGTACATGC
ACATGAGCTACGCGACGTGCGCGCTGAAAGGGCGGGAAGGACAGATGCGTCTCGTCGTCGACGTGATCGACGTTCAGAGC
AACCAGGTGATCGCGCACAGCGAGGCGCAGTCGACGAAGCTGATCGAGGACGCCGCGACGATCAACGTCACGCTGAATCA
GGCCGCCGAGCCGCGCAGCGGCTACACGGTCAGGCTGTCGAGCAAGTGGGCGACGTACGACAGCTACGCGGGCACGCCGT
GGACGTCGAGCTATTGCAGCGGCGGCAAGACGTTTCTCCAGACGCCGCTCGTGACCGGCTGGACGATCAATTCGTTCTAT
TGA

Upstream 100 bases:

>100_bases
CCGGTCGGGCGGATCCGAACGCGCCCGCGAGCGGCGTGCCGCTGCCCGCGGGGCTCGCGATCGCCGACGGCCTGCCGGTC
TGGATGGGGCAGGCGTACTG

Downstream 100 bases:

>100_bases
ACGGCGCTTCGCCGCGCGTGGCCGCCGCCGCGCGGCGCTGCGGTTAACTGCAGGGGTCTCCCATTCGCGGCGCGCGCCCG
TCCGAGCGACGGCGCGCGCC

Product: putative type IV pilus protein

Products: NA

Alternate protein names: Type IV Prepilin PilV Protein; Type IV B Pilus Protein; Type IV Pilus Biogenesis Protein PilV; Type IV Pilus Protein PilV

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPGQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTINSFY

Sequences:

>Translated_560_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPGQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTINSFY
>Mature_560_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPGQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTINSFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59015; Mature: 59015

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAAT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RALKRDYDAWLQRANAQTPVVMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCE
DALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALARGAFDAWRMPLGAYLGGSSPT
EEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHCCHHHEECCCCCC
CDPADAAPPNAGHLANEIFFNGPGQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
CCCCCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEHHHHCC
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRLTLDTFRAFAWTGNAWQALAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPN
EEEEHHHCEEEEEECCCEEEEEEECCCCEEECCEECCCEEEEEEEEEEECCCCCCCCCCC
AGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILMETPGATDFSCGYTYRGPYPNP
CCEEEECCCCCEEEECCCCCCCCCCCEECCCHHHHHHEECCCCCCCCCCCCEECCCCCCC
PLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
CEEEECCCCCEEEEECCCEEECCCCEEEEEEEHHHEEEEEEEECCCCCEEEEEEEEECCC
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCS
CEEEEECCCCHHHHEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHC
GGKTFLQTPLVTGWTINSFY
CCCHHHCCCCEECEEECCCC
>Mature Secondary Structure
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAAT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RALKRDYDAWLQRANAQTPVVMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCE
DALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALARGAFDAWRMPLGAYLGGSSPT
EEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHCCHHHEECCCCCC
CDPADAAPPNAGHLANEIFFNGPGQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
CCCCCCCCCCCCCHHHEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEHHHHCC
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRLTLDTFRAFAWTGNAWQALAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPN
EEEEHHHCEEEEEECCCEEEEEEECCCCEEECCEECCCEEEEEEEEEEECCCCCCCCCCC
AGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILMETPGATDFSCGYTYRGPYPNP
CCEEEECCCCCEEEECCCCCCCCCCCEECCCHHHHHHEECCCCCCCCCCCCEECCCCCCC
PLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
CEEEECCCCCEEEEECCCEEECCCCEEEEEEEHHHEEEEEEEECCCCCEEEEEEEEECCC
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCS
CEEEEECCCCHHHHEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHC
GGKTFLQTPLVTGWTINSFY
CCCHHHCCCCEECEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA