| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is bcsA [H]
Identifier: 126445531
GI number: 126445531
Start: 1041312
End: 1043285
Strand: Reverse
Name: bcsA [H]
Synonym: BURPS668_A1082
Alternate gene names: 126445531
Gene position: 1043285-1041312 (Counterclockwise)
Preceding gene: 126444567
Following gene: 126444944
Centisome position: 33.36
GC content: 70.52
Gene sequence:
>1974_bases ATGACGATGTTCGACTTCTTTCTCGCCAACCGCTCGCTCCTCGACATCAACGGCGGCGTGCTGCTCGCCGTGCTGCTGCT CACGCGCGCCGGCAGGCGCGAACGCGCGGCCGACCGGATCGTGTTCGGCGGCGTGACCGTCGTGCTGCTGCTCGTCTATC TGGCGTGGCGCGCGACGCAGACGCTGCCTGAGCCGCGCATGGATTTTCCGAGCGCATGGGCGCACGTGTTCTTCGGTTTC GAATGCATGGCGCTCGCGTATACGCTGATCTCCGTCGCCGTGCTCACGCGCACGACCGAGCGCACGCCGCAAGCCGACGC CGGCGAGGCCGCGCTGCGGCGCGCGGCCGCGCCGCCGCGCGTCGACATCTTCATCGCGACCTACAACGAGGGGCTCGACA TCCTGGAGAAGACGATCGTCGCCGCGCTCGCGATCGACTACCCGGATTTTCGCGTGTGGGTGCTCGACGACACGCGCCGC GACTGGCTCAAGGCGTTCTGCGACCAGGTGGGCGCGCGCTACGCGACGCGCGCGGACAACGCGCACGCGAAGGCCGGCAA TCTCAACAACGGCCTGCGCCTGAGCGCGCGAAGCGAAGGCGGCGGCGCGCCGTACATCATGGTGCTCGACGCCGATTTCG CGCCGCACCGCAAGATCCTGCTGCGCACGGTCGGGCTCTTCGCCGATCGCACGGTCGGCATCGTGCAGACCCCGCAGTTC TACTACAACGCCGATCCCGTGCAGTACAACCTGCGCTCGGCCGAATGCTGGGTCGACGAGCAGCGCGCGTTCTTCGACGT GATGCAGCCCGCGAAGGACGCATGGGGCGCGGCGTTCTGCATCGGCACGTCGTTCGTCGTGCGACGCGATCTCGTCGAGC GCATCGGCGGCTTTCCGACCGGCACGGTCACCGAGGACATCCACCTCACGTATCGGCTGATGCGGCACGGCTACGTGACG CGCTGGCTCAACGAGCGGCTGTCGGTCGGCCTGTCGGCCGAGGGGCTGCCCGAATACATCAGCCAGCGCAGCCGCTGGGC GCTCGGCACGATCCAGGTCGCGCTGACGCCGGACGGCCCGCTGCGCGGCCGCGGCTACACGTTCGCGCAGCGGCTGCACT ACGTGCACGGCATGCTGCACTGGCTGAGCCGCCCGTTCACGCTGATGCTGCTGCTCGGCCCGCTCCTGTACTGGTACTTC GACATCCCGACGCTCTACGGCGAGCCGCTGCAGTTTCTCGCCTACGGCCTGCCCGCGCTGATCGCCTACTGGGGCTACAG CATGTGGATCACCGGCCGGCGCGCGCTGCCCGTGTTCACCGAAGTCACGCAGATCGTCTGCGCGCTCGCCGTCAGCCTGT CGCTCGCGAGCGCGCTCGTGCGGCCGTTCGGTCGCCCGTTCAAGGTGACGAACAAGGGCCTCGACCGCTCGAAGCTGATC GTCCACGGCAGGTTCGCCGCGTTCTACGCGGGCCTGCTCGTGCTGTCCGCGCTCGGGCTCGGTCGCGCGCTCGCGAGCGC GCCCGGCGCGCCGGGGCTTGCGTTCAACGCCGCGTGGACCGCGATTTCGCTCGCGCTCTATCTCGCGTCGCTGCTCGTGT GCATCGAGCTGCCGCGGCCGCGCAGGGAGGAGCGCTTCCCGTATCGCGCACGGGCGCGGCTGCGCGTCGGCGATCGCGAG TACGCGGTCGCGACGCGCGATCTGTCGTGCAACGGCGCCGCCGTGACGACGGCGCAGGCCGCGTCGCTGCCGCTGCATGC GGCGGGCGCGCTGTGGCTCGCGCCGATCGGCTGGATCCCGTGCCGCATCGTGCGTCGCGACGGCGCGCTGCTCGGCGTCG CGCTCGGCGCGGACACCGCCGCGCGGCACGGCCTGATCCGGCTGTTGTTCGGCGATCCGCCTCACAACATCGCGATTCGC GGCCGACCCCGGCTCGCGATCTCGCGCCTGATGCAGCGCGCGCTGTCCGGCTGA
Upstream 100 bases:
>100_bases CCGCGTGGGCCGTGCTCGCGGCGGCGGGCTGGAATCCGTTTCGCCCCGGCGGCTGCCTCGCCGCGGGCTACCCGGGCGAC GCCGCCCCTGCCTGCGGAGC
Downstream 100 bases:
>100_bases ACGCCGCGAGCGCCGCTTGCCCACCGTCTCGATTCTCGATGCGAGGAGCCGCCGACCATGCATAGCCCACCGTTTCTTTC ATCGCCCAAGCGCGCGCTGC
Product: glycosyl transferase group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTMFDFFLANRSLLDINGGVLLAVLLLTRAGRRERAADRIVFGGVTVVLLLVYLAWRATQTLPEPRMDFPSAWAHVFFGF ECMALAYTLISVAVLTRTTERTPQADAGEAALRRAAAPPRVDIFIATYNEGLDILEKTIVAALAIDYPDFRVWVLDDTRR DWLKAFCDQVGARYATRADNAHAKAGNLNNGLRLSARSEGGGAPYIMVLDADFAPHRKILLRTVGLFADRTVGIVQTPQF YYNADPVQYNLRSAECWVDEQRAFFDVMQPAKDAWGAAFCIGTSFVVRRDLVERIGGFPTGTVTEDIHLTYRLMRHGYVT RWLNERLSVGLSAEGLPEYISQRSRWALGTIQVALTPDGPLRGRGYTFAQRLHYVHGMLHWLSRPFTLMLLLGPLLYWYF DIPTLYGEPLQFLAYGLPALIAYWGYSMWITGRRALPVFTEVTQIVCALAVSLSLASALVRPFGRPFKVTNKGLDRSKLI VHGRFAAFYAGLLVLSALGLGRALASAPGAPGLAFNAAWTAISLALYLASLLVCIELPRPRREERFPYRARARLRVGDRE YAVATRDLSCNGAAVTTAQAASLPLHAAGALWLAPIGWIPCRIVRRDGALLGVALGADTAARHGLIRLLFGDPPHNIAIR GRPRLAISRLMQRALSG
Sequences:
>Translated_657_residues MTMFDFFLANRSLLDINGGVLLAVLLLTRAGRRERAADRIVFGGVTVVLLLVYLAWRATQTLPEPRMDFPSAWAHVFFGF ECMALAYTLISVAVLTRTTERTPQADAGEAALRRAAAPPRVDIFIATYNEGLDILEKTIVAALAIDYPDFRVWVLDDTRR DWLKAFCDQVGARYATRADNAHAKAGNLNNGLRLSARSEGGGAPYIMVLDADFAPHRKILLRTVGLFADRTVGIVQTPQF YYNADPVQYNLRSAECWVDEQRAFFDVMQPAKDAWGAAFCIGTSFVVRRDLVERIGGFPTGTVTEDIHLTYRLMRHGYVT RWLNERLSVGLSAEGLPEYISQRSRWALGTIQVALTPDGPLRGRGYTFAQRLHYVHGMLHWLSRPFTLMLLLGPLLYWYF DIPTLYGEPLQFLAYGLPALIAYWGYSMWITGRRALPVFTEVTQIVCALAVSLSLASALVRPFGRPFKVTNKGLDRSKLI VHGRFAAFYAGLLVLSALGLGRALASAPGAPGLAFNAAWTAISLALYLASLLVCIELPRPRREERFPYRARARLRVGDRE YAVATRDLSCNGAAVTTAQAASLPLHAAGALWLAPIGWIPCRIVRRDGALLGVALGADTAARHGLIRLLFGDPPHNIAIR GRPRLAISRLMQRALSG >Mature_656_residues TMFDFFLANRSLLDINGGVLLAVLLLTRAGRRERAADRIVFGGVTVVLLLVYLAWRATQTLPEPRMDFPSAWAHVFFGFE CMALAYTLISVAVLTRTTERTPQADAGEAALRRAAAPPRVDIFIATYNEGLDILEKTIVAALAIDYPDFRVWVLDDTRRD WLKAFCDQVGARYATRADNAHAKAGNLNNGLRLSARSEGGGAPYIMVLDADFAPHRKILLRTVGLFADRTVGIVQTPQFY YNADPVQYNLRSAECWVDEQRAFFDVMQPAKDAWGAAFCIGTSFVVRRDLVERIGGFPTGTVTEDIHLTYRLMRHGYVTR WLNERLSVGLSAEGLPEYISQRSRWALGTIQVALTPDGPLRGRGYTFAQRLHYVHGMLHWLSRPFTLMLLLGPLLYWYFD IPTLYGEPLQFLAYGLPALIAYWGYSMWITGRRALPVFTEVTQIVCALAVSLSLASALVRPFGRPFKVTNKGLDRSKLIV HGRFAAFYAGLLVLSALGLGRALASAPGAPGLAFNAAWTAISLALYLASLLVCIELPRPRREERFPYRARARLRVGDREY AVATRDLSCNGAAVTTAQAASLPLHAAGALWLAPIGWIPCRIVRRDGALLGVALGADTAARHGLIRLLFGDPPHNIAIRG RPRLAISRLMQRALSG
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component responsible for the structural integrity and rigidity of self-supporting mats characteristic of the "wrink
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=522, Percent_Identity=30.4597701149425, Blast_Score=232, Evalue=5e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR005150 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF03552 Cellulose_synt; PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 72675; Mature: 72544
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMFDFFLANRSLLDINGGVLLAVLLLTRAGRRERAADRIVFGGVTVVLLLVYLAWRATQ CCHHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHEEECHHHHHHHHHHHHHHHHH TLPEPRMDFPSAWAHVFFGFECMALAYTLISVAVLTRTTERTPQADAGEAALRRAAAPPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC VDIFIATYNEGLDILEKTIVAALAIDYPDFRVWVLDDTRRDWLKAFCDQVGARYATRADN EEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC AHAKAGNLNNGLRLSARSEGGGAPYIMVLDADFAPHRKILLRTVGLFADRTVGIVQTPQF CCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCE YYNADPVQYNLRSAECWVDEQRAFFDVMQPAKDAWGAAFCIGTSFVVRRDLVERIGGFPT EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCC GTVTEDIHLTYRLMRHGYVTRWLNERLSVGLSAEGLPEYISQRSRWALGTIQVALTPDGP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC LRGRGYTFAQRLHYVHGMLHWLSRPFTLMLLLGPLLYWYFDIPTLYGEPLQFLAYGLPAL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH IAYWGYSMWITGRRALPVFTEVTQIVCALAVSLSLASALVRPFGRPFKVTNKGLDRSKLI HHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEE VHGRFAAFYAGLLVLSALGLGRALASAPGAPGLAFNAAWTAISLALYLASLLVCIELPRP EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC RREERFPYRARARLRVGDREYAVATRDLSCNGAAVTTAQAASLPLHAAGALWLAPIGWIP CCCCCCCHHHHHEEEECCCEEEEEECCCCCCCCEEEEHHHHCCCCHHCCHHHHCCCCCCC CRIVRRDGALLGVALGADTAARHGLIRLLFGDPPHNIAIRGRPRLAISRLMQRALSG EEEEECCCCEEEEEECCCHHHHCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure TMFDFFLANRSLLDINGGVLLAVLLLTRAGRRERAADRIVFGGVTVVLLLVYLAWRATQ CHHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHEEECHHHHHHHHHHHHHHHHH TLPEPRMDFPSAWAHVFFGFECMALAYTLISVAVLTRTTERTPQADAGEAALRRAAAPPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC VDIFIATYNEGLDILEKTIVAALAIDYPDFRVWVLDDTRRDWLKAFCDQVGARYATRADN EEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCC AHAKAGNLNNGLRLSARSEGGGAPYIMVLDADFAPHRKILLRTVGLFADRTVGIVQTPQF CCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCE YYNADPVQYNLRSAECWVDEQRAFFDVMQPAKDAWGAAFCIGTSFVVRRDLVERIGGFPT EECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCC GTVTEDIHLTYRLMRHGYVTRWLNERLSVGLSAEGLPEYISQRSRWALGTIQVALTPDGP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEEEECCCCC LRGRGYTFAQRLHYVHGMLHWLSRPFTLMLLLGPLLYWYFDIPTLYGEPLQFLAYGLPAL CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH IAYWGYSMWITGRRALPVFTEVTQIVCALAVSLSLASALVRPFGRPFKVTNKGLDRSKLI HHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEE VHGRFAAFYAGLLVLSALGLGRALASAPGAPGLAFNAAWTAISLALYLASLLVCIELPRP EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC RREERFPYRARARLRVGDREYAVATRDLSCNGAAVTTAQAASLPLHAAGALWLAPIGWIP CCCCCCCHHHHHEEEECCCEEEEEECCCCCCCCEEEEHHHHCCCCHHCCHHHHCCCCCCC CRIVRRDGALLGVALGADTAARHGLIRLLFGDPPHNIAIRGRPRLAISRLMQRALSG EEEEECCCCEEEEEECCCHHHHCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12019221 [H]