| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126444567
Identifier: 126444567
GI number: 126444567
Start: 1043282
End: 1044607
Strand: Reverse
Name: 126444567
Synonym: BURPS668_A1083
Alternate gene names: NA
Gene position: 1044607-1043282 (Counterclockwise)
Preceding gene: 126443596
Following gene: 126445531
Centisome position: 33.4
GC content: 76.17
Gene sequence:
>1326_bases ATGCCGATGAGATTTCACCTCGTCCGCCGCCTGGGCCGTGCGGCATCGTTCGCGATCGGGCCGATGGCCTCGCTGCTGTT CGTCGCCCACGGCGCCGCCGGCGCCGAGCCGCCGCGCGCGGCGCTGCTCGCGGCCGGATGCAAGACGCTCGCCGAGCGCG TGCACGCGCCCCCCGGCTCGGGGCCCGTCTTTCTCGGCAGCTACGAGCCCGCGCCCGGCGGCGCGGCGCTCGCGGGCGCG CTGACGCAGGCCGCGTTCGTCTATGACAACGCGCTCGCGAGCATCGCGCTCATCGCCTGCCACCGCCCCGGCGACGCGCG CCGCATCGCCGACGCGATCCTGCAGGCGAGCCGGCAGGATCGCCACTACCGCGACGCGCGCGTGCGCAACGCGTACCGCG CGGGTGCGCTGCCGCCGGGGCCCGCACCGCTGCCCGGCTGGTGGGACACGCCGAGCAAGCGCTGGTTCGAGGACGCCTAT CAGGCGGGCACCGCGACCGGCAACGTCGCGTGGGCCGCGCTGTCGCTGCTCGCCGTGTACGAAGCGACGCGCGAGCGGCG CTATCTCGACGGCGCCGCCGCGCTGATGGGCTGGGTCGACCCCGGCCGGCTCGACGCGACGGCGCCGGCCGGCTACGTCG GCGGCGAGTTCGGCCATGAGCCGCAGCCGCTCCGCCAGGGCTGGAAATCCACCGAGCACAACGTCGATGCGTACGCCGTC TTCCGCTGGCTCGCGGCGCGCACGGGCGACGCCCGCTGGCACGCGGCCGCCGGGCGCGCGCGGCGCTTCGTGTCGGCGAT GTGGGCGCCGGGCGACGGCCGCTTCCTGATCGGCACGCGCGACGACGGGCACACGCCGAACACCGGGCCGTCCGCGCTCG ACGCGTCGCTCTGGCCGCTGCTCGCGATGCCGGATGCGCCCGCCGACTGGCGCCGCTCGCTCGCGTGGGTCGAGCGCGCA CATCGCATCGACGGCGGCTACGGCTTCAACGCGCATCCGGACGGTGTCTGGACCGAAGGCACCGCGCAGGCGGCGCTCGC GTTGCAGGCGGCCGGCCGCTCGGACGACGCGCGGCCGCTGTGGGCGCTGCTGATGTCGCAGCGCGCGCCGTCCGGCCTGC TGTTTGCGACGCCCGAGCCGAGCATTCGCACCGGCCTGTCGATCGGGCCGACGTCCAAGACCGACGACTTCCGCTACTTC CATCTGCCGCACCTGGGCGCGACCGCGTGGGCCGTGCTCGCGGCGGCGGGCTGGAATCCGTTTCGCCCCGGCGGCTGCCT CGCCGCGGGCTACCCGGGCGACGCCGCCCCTGCCTGCGGAGCATGA
Upstream 100 bases:
>100_bases AGCGGGCCGCGGACGGGCGGCGCTGGCTGAACGAGCGGGCGAGCGCGGCCCGACGCTGGCTCGACGATCTGAAATCGGCG GCCTGAGCGCGCGCAGCCCC
Downstream 100 bases:
>100_bases CGATGTTCGACTTCTTTCTCGCCAACCGCTCGCTCCTCGACATCAACGGCGGCGTGCTGCTCGCCGTGCTGCTGCTCACG CGCGCCGGCAGGCGCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPMRFHLVRRLGRAASFAIGPMASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHAPPGSGPVFLGSYEPAPGGAALAGA LTQAAFVYDNALASIALIACHRPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAY QAGTATGNVAWAALSLLAVYEATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAV FRWLAARTGDARWHAAAGRARRFVSAMWAPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERA HRIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYF HLPHLGATAWAVLAAAGWNPFRPGGCLAAGYPGDAAPACGA
Sequences:
>Translated_441_residues MPMRFHLVRRLGRAASFAIGPMASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHAPPGSGPVFLGSYEPAPGGAALAGA LTQAAFVYDNALASIALIACHRPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAY QAGTATGNVAWAALSLLAVYEATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAV FRWLAARTGDARWHAAAGRARRFVSAMWAPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERA HRIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYF HLPHLGATAWAVLAAAGWNPFRPGGCLAAGYPGDAAPACGA >Mature_440_residues PMRFHLVRRLGRAASFAIGPMASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHAPPGSGPVFLGSYEPAPGGAALAGAL TQAAFVYDNALASIALIACHRPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQ AGTATGNVAWAALSLLAVYEATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVF RWLAARTGDARWHAAAGRARRFVSAMWAPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAH RIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFH LPHLGATAWAVLAAAGWNPFRPGGCLAAGYPGDAAPACGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46737; Mature: 46606
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRFHLVRRLGRAASFAIGPMASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHAPPGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GPVFLGSYEPAPGGAALAGALTQAAFVYDNALASIALIACHRPGDARRIADAILQASRQD CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH RHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHH FRWLAARTGDARWHAAAGRARRFVSAMWAPGDGRFLIGTRDDGHTPNTGPSALDASLWPL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH LAMPDAPADWRRSLAWVERAHRIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPL EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH WALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFHLPHLGATAWAVLAAAGWNP HHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCC FRPGGCLAAGYPGDAAPACGA CCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure PMRFHLVRRLGRAASFAIGPMASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHAPPGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GPVFLGSYEPAPGGAALAGALTQAAFVYDNALASIALIACHRPGDARRIADAILQASRQD CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH RHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHH FRWLAARTGDARWHAAAGRARRFVSAMWAPGDGRFLIGTRDDGHTPNTGPSALDASLWPL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH LAMPDAPADWRRSLAWVERAHRIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPL EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH WALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFHLPHLGATAWAVLAAAGWNP HHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCC FRPGGCLAAGYPGDAAPACGA CCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA