| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126445256
Identifier: 126445256
GI number: 126445256
Start: 520028
End: 520594
Strand: Reverse
Name: 126445256
Synonym: BURPS668_A0553
Alternate gene names: NA
Gene position: 520594-520028 (Counterclockwise)
Preceding gene: 126444546
Following gene: 126443075
Centisome position: 16.65
GC content: 65.08
Gene sequence:
>567_bases ATGTCGCCGGACCATCCGTGGAATTCGCTGGAGATCGTCAAGCTCGCCGCCGAAGTGCTCACGCCGGTTTCCGTCGCCGC GTTCGGCTGGCTCGTCAGCCATCGGCTCAAGCAGCTCGAGCTCGTCCAGTGGACGAACCAGAAGCTGATCGAAAAACGGC TCGCGCTGTACGACACGATCGCGCCGCTCCTGAACCGCCTGCTGTGCTTCTACACGTGGGTCGGCCCGTGGAAGGACATC TCGCCCGACGACGTGATCCGCGCCAAGCGCGAACTCGACCAGACGATCCACATCTATCGCCACCTGTTCGACGACGACGT CTATCGCGCCTATCAGGCGTATCTCGACGCGCTGTTCGACACGCATTCCGGCGCGGGCCGGGACGCGCGGATCAAATCGA CGATCGCGAGCCCCGACGGCGACCGCATCGGCAACGGCACGTATCGTTGGAATCCCGCGTGGGCCGAGCGCTTCACGGAC GCGAACGTCGCGTCGCGAGACGAAGTGAGGGCGCGCTATCAGCGGATCATGGACGGGCTGCGCATCTCGCTGGGCGTCGC GCGTTAG
Upstream 100 bases:
>100_bases CGTGCGCGCGCTGTACGAGCAGGCGGCCTGACACGCCGCGGCGCGCGCGCCTCGCGGCGCCCGGCCAATGCTACATTGGG GCTTTCGACGAGGAGCCCGC
Downstream 100 bases:
>100_bases GCCTGTTCACGCTCATAACGGGTTGGCGAACACGCCCTTTCGGCCGCCGGCTCGGCTCGCCGCAGCATGCCCGATCGCCG CGACGAAGGACGCCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDI SPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTD ANVASRDEVRARYQRIMDGLRISLGVAR
Sequences:
>Translated_188_residues MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDI SPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTD ANVASRDEVRARYQRIMDGLRISLGVAR >Mature_187_residues SPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDIS PDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDA NVASRDEVRARYQRIMDGLRISLGVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21669; Mature: 21538
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLLNRLLCFYTWVGPWKDISPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDANVASRDEVRARYQRIMDGL CCCCCCCCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RISLGVAR HHHHCCCC >Mature Secondary Structure SPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLLNRLLCFYTWVGPWKDISPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDANVASRDEVRARYQRIMDGL CCCCCCCCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RISLGVAR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA