Click here to switch to the map view.

The map label for this gene is yjiN [H]

Identifier: 126445074

GI number: 126445074

Start: 2583918

End: 2585252

Strand: Reverse

Name: yjiN [H]

Synonym: BURPS668_A2699

Alternate gene names: 126445074

Gene position: 2585252-2583918 (Counterclockwise)

Preceding gene: 126442628

Following gene: 126443712

Centisome position: 82.66

GC content: 67.42

Gene sequence:

>1335_bases
ATGCATGACGAGACGAAACCGAGACGAAACCGATACGACCGGATCGCGATGCTCGACGACAAGGAACGGGAACTCAGAAA
CAGCAAGCGGCGCGCGCTCGCGCTGCTGCTCGCCGCGGCGGGCGTGTTCGCGGCGACGCTGTTCGCGCCGCGCGGCTTCT
GGATCGACGGCGTCAAGGCGGTGGCGGAGGCGTCGATGGTGGGCGCGCTCGCCGACTGGTTCGCGGTGGTCGCGCTGTTT
CGCCGCGTGCCGATTCCGTTCGTGTCGCGGCACACGGAGATCATTCCGCAGAACAAGGACAAGATCGCCGACAATCTCGC
CGCGTTCGTGCACGAGAAGTTTCTCGATCCGGCGTCGATCGTCGCGCTGATCAAGCGGCACGATCCGGCCGCCCGGCTCG
CGCAGTGGCTCGCGACGCCGCGCAACGCGAACGTGCTGGGCGGCTACGCGGCGCGCCTCGTCGCGTTCGGGCTCGACATG
ACCGACGACGCGCGAATCCAGTCGTTCGTGAAGGATGCGTTCCATGCGGTGCTCGTGCGGATCGACCTGTCGCAATCGGC
GGGCGCGATCCTCGACACGCTGACGAAGGACGGCCGCCACCAGGCGCTCCTCGACGACGGCATCGCGCAGATCGTCGGAT
TCCTTCGCGATCCCGACAATCGCGCGTCGATCGCGGCGTACATCGTCGACTGGCTCAAATACCAGTTCCCGAAGATGGAG
AAGCTGCTGCCGACGAACTGGCTCGGCGAGCACGGCGCGGAGCTGATCTCGAACGTCGTCACGCGGGTGCTCACGCAGAT
CGCCGAAGACCCGGAGCACCGGCTGCGGCGCAGCTTCGACGACGCGGCGGCGCGCCTCGTCACGCGGCTGAAGAGCGATC
CGGCGTTCATCGCGAAGGGCGAGGAGATCAAGCGCTACCTGCGCGACGGCGACGCGTTCAACCGTTACGTGAAGGACATG
TGGGACCAACTGCGCGCATGGCTGAAGGCCGATCTCGCGCGCGACGATTCGGTTGTCCACCGGCGCGCGACGGCGCTCGG
CGGCTGGCTCGGCGAGCGTCTCGCGCAGAGCCCGGAGCTGCGCGATTCGATGAACGAGCACGTCGAGCGCGCGGCGAGCG
AGATGGCGCCCGAGTTCGCCGAATTCCTGACGCGGCACATCAGCGACACCGTGAAGAACTGGGACGCGCGCGAGATGTCG
CGGCAGATCGAGCTGAACATCGGCAAGGACCTGCAGTACATCCGGATCAACGGCACGCTGGTCGGCGGCTTGATCGGGCT
CGGGCTGTATGCGGTGTCGAGCGCCGCGCGGTGGGCGGGCGCGCTGCCTTACTGA

Upstream 100 bases:

>100_bases
GGCTTCGTCGCGTACGGCGTCGAGCCGCGTGCGCTCGACGCAGCGAACGGCCGCGCGGACGCTCTGCCGATGGTGAGGTT
TCCGCCGTTGGCGCCGCCGC

Downstream 100 bases:

>100_bases
GCCGCGCGCGCCGCCGCCGCATCGCCGCGCGCGAGCATCAGGCCTGCTGAACGGATTTGACATGCGCGAACTCGACGCGA
CACGCGCGCTCATGCTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MHDETKPRRNRYDRIAMLDDKERELRNSKRRALALLLAAAGVFAATLFAPRGFWIDGVKAVAEASMVGALADWFAVVALF
RRVPIPFVSRHTEIIPQNKDKIADNLAAFVHEKFLDPASIVALIKRHDPAARLAQWLATPRNANVLGGYAARLVAFGLDM
TDDARIQSFVKDAFHAVLVRIDLSQSAGAILDTLTKDGRHQALLDDGIAQIVGFLRDPDNRASIAAYIVDWLKYQFPKME
KLLPTNWLGEHGAELISNVVTRVLTQIAEDPEHRLRRSFDDAAARLVTRLKSDPAFIAKGEEIKRYLRDGDAFNRYVKDM
WDQLRAWLKADLARDDSVVHRRATALGGWLGERLAQSPELRDSMNEHVERAASEMAPEFAEFLTRHISDTVKNWDAREMS
RQIELNIGKDLQYIRINGTLVGGLIGLGLYAVSSAARWAGALPY

Sequences:

>Translated_444_residues
MHDETKPRRNRYDRIAMLDDKERELRNSKRRALALLLAAAGVFAATLFAPRGFWIDGVKAVAEASMVGALADWFAVVALF
RRVPIPFVSRHTEIIPQNKDKIADNLAAFVHEKFLDPASIVALIKRHDPAARLAQWLATPRNANVLGGYAARLVAFGLDM
TDDARIQSFVKDAFHAVLVRIDLSQSAGAILDTLTKDGRHQALLDDGIAQIVGFLRDPDNRASIAAYIVDWLKYQFPKME
KLLPTNWLGEHGAELISNVVTRVLTQIAEDPEHRLRRSFDDAAARLVTRLKSDPAFIAKGEEIKRYLRDGDAFNRYVKDM
WDQLRAWLKADLARDDSVVHRRATALGGWLGERLAQSPELRDSMNEHVERAASEMAPEFAEFLTRHISDTVKNWDAREMS
RQIELNIGKDLQYIRINGTLVGGLIGLGLYAVSSAARWAGALPY
>Mature_444_residues
MHDETKPRRNRYDRIAMLDDKERELRNSKRRALALLLAAAGVFAATLFAPRGFWIDGVKAVAEASMVGALADWFAVVALF
RRVPIPFVSRHTEIIPQNKDKIADNLAAFVHEKFLDPASIVALIKRHDPAARLAQWLATPRNANVLGGYAARLVAFGLDM
TDDARIQSFVKDAFHAVLVRIDLSQSAGAILDTLTKDGRHQALLDDGIAQIVGFLRDPDNRASIAAYIVDWLKYQFPKME
KLLPTNWLGEHGAELISNVVTRVLTQIAEDPEHRLRRSFDDAAARLVTRLKSDPAFIAKGEEIKRYLRDGDAFNRYVKDM
WDQLRAWLKADLARDDSVVHRRATALGGWLGERLAQSPELRDSMNEHVERAASEMAPEFAEFLTRHISDTVKNWDAREMS
RQIELNIGKDLQYIRINGTLVGGLIGLGLYAVSSAARWAGALPY

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=415, Percent_Identity=54.2168674698795, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 49824; Mature: 49824

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDETKPRRNRYDRIAMLDDKERELRNSKRRALALLLAAAGVFAATLFAPRGFWIDGVKA
CCCCCCCHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VAEASMVGALADWFAVVALFRRVPIPFVSRHTEIIPQNKDKIADNLAAFVHEKFLDPASI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
VALIKRHDPAARLAQWLATPRNANVLGGYAARLVAFGLDMTDDARIQSFVKDAFHAVLVR
HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IDLSQSAGAILDTLTKDGRHQALLDDGIAQIVGFLRDPDNRASIAAYIVDWLKYQFPKME
EECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
KLLPTNWLGEHGAELISNVVTRVLTQIAEDPEHRLRRSFDDAAARLVTRLKSDPAFIAKG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
EEIKRYLRDGDAFNRYVKDMWDQLRAWLKADLARDDSVVHRRATALGGWLGERLAQSPEL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
RDSMNEHVERAASEMAPEFAEFLTRHISDTVKNWDAREMSRQIELNIGKDLQYIRINGTL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEECCHH
VGGLIGLGLYAVSSAARWAGALPY
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHDETKPRRNRYDRIAMLDDKERELRNSKRRALALLLAAAGVFAATLFAPRGFWIDGVKA
CCCCCCCHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VAEASMVGALADWFAVVALFRRVPIPFVSRHTEIIPQNKDKIADNLAAFVHEKFLDPASI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
VALIKRHDPAARLAQWLATPRNANVLGGYAARLVAFGLDMTDDARIQSFVKDAFHAVLVR
HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IDLSQSAGAILDTLTKDGRHQALLDDGIAQIVGFLRDPDNRASIAAYIVDWLKYQFPKME
EECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
KLLPTNWLGEHGAELISNVVTRVLTQIAEDPEHRLRRSFDDAAARLVTRLKSDPAFIAKG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
EEIKRYLRDGDAFNRYVKDMWDQLRAWLKADLARDDSVVHRRATALGGWLGERLAQSPEL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
RDSMNEHVERAASEMAPEFAEFLTRHISDTVKNWDAREMSRQIELNIGKDLQYIRINGTL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEECCHH
VGGLIGLGLYAVSSAARWAGALPY
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]