| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444177
Identifier: 126444177
GI number: 126444177
Start: 1905174
End: 1905599
Strand: Reverse
Name: 126444177
Synonym: BURPS668_A1967
Alternate gene names: NA
Gene position: 1905599-1905174 (Counterclockwise)
Preceding gene: 126445541
Following gene: 126443658
Centisome position: 60.93
GC content: 73.24
Gene sequence:
>426_bases ATGTCCGATTGCAGTTTCCACTCGCGCCGCCCGCGTCGTGCACGCCGCGCGGCCGGCGTGTGCGCGGCGCTCGCCGTGCT CGCGGCCACGCTCTGGGCCGCGCCCGCGCGCGCGCAACCGGAGCCGCCGCCCGCGTCGGGCGCGGTGACCGAAACGGCGC CCGACAGCCCGACGCGGGCATTCGAGCGCGCCGATCGCAAGATGATGGACGCGATGCGCGCCGCGCCGTACACGGGCGAC GTCGATCGCGATTTCGTCGCGCACATGGCGCCGCATCATCAGGGCGCGATCGACATGGCGCAGGTGGAGTTGAGGAGCGG CAAGGACCCGGCGCTCAAGCAGCTCGCGCGCCGGATCATCGCCGCGCAGCGCGACGAGATCGCATTCATGGAGCGTTGGC AGAAGCAGCACGGCGCCGGCCGCTGA
Upstream 100 bases:
>100_bases CGGATCGCGCAAGGGCGCGGCGGCCGGCGGGCCGGCGTGACGCCCGAGCGCGCATCGCGCGGATGCGGCACCGTTTGCGC ACCGATCATGGAGAAACGAC
Downstream 100 bases:
>100_bases TTCGCGCGGCCGCGCGTCGGCCGTCGGCGGCGATGCGCTGCGATTCCATTCGGCTCGAAGCGGGCGCAGGTGCGGCGCGC GCCGCACCTGCCGGCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSDCSFHSRRPRRARRAAGVCAALAVLAATLWAAPARAQPEPPPASGAVTETAPDSPTRAFERADRKMMDAMRAAPYTGD VDRDFVAHMAPHHQGAIDMAQVELRSGKDPALKQLARRIIAAQRDEIAFMERWQKQHGAGR
Sequences:
>Translated_141_residues MSDCSFHSRRPRRARRAAGVCAALAVLAATLWAAPARAQPEPPPASGAVTETAPDSPTRAFERADRKMMDAMRAAPYTGD VDRDFVAHMAPHHQGAIDMAQVELRSGKDPALKQLARRIIAAQRDEIAFMERWQKQHGAGR >Mature_140_residues SDCSFHSRRPRRARRAAGVCAALAVLAATLWAAPARAQPEPPPASGAVTETAPDSPTRAFERADRKMMDAMRAAPYTGDV DRDFVAHMAPHHQGAIDMAQVELRSGKDPALKQLARRIIAAQRDEIAFMERWQKQHGAGR
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15454; Mature: 15323
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDCSFHSRRPRRARRAAGVCAALAVLAATLWAAPARAQPEPPPASGAVTETAPDSPTRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH FERADRKMMDAMRAAPYTGDVDRDFVAHMAPHHQGAIDMAQVELRSGKDPALKQLARRII HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH AAQRDEIAFMERWQKQHGAGR HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDCSFHSRRPRRARRAAGVCAALAVLAATLWAAPARAQPEPPPASGAVTETAPDSPTRA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH FERADRKMMDAMRAAPYTGDVDRDFVAHMAPHHQGAIDMAQVELRSGKDPALKQLARRII HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH AAQRDEIAFMERWQKQHGAGR HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA