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The map label for this gene is grsT [H]

Identifier: 126444062

GI number: 126444062

Start: 1571153

End: 1572064

Strand: Reverse

Name: grsT [H]

Synonym: BURPS668_A1642

Alternate gene names: 126444062

Gene position: 1572064-1571153 (Counterclockwise)

Preceding gene: 126443143

Following gene: 126444208

Centisome position: 50.27

GC content: 72.37

Gene sequence:

>912_bases
ATGACCAGCATCCCCGTTAGACTCGATCGGTTCGCGCCGGCGGCCGACCCGGCCGACCCGGCCGCTCCGGCCGATTTGGC
CGATTTGGCCGATTTGGCCGATTTGGCCGCCGCCACGGACGGCGCCCCGGCGGCGGCGTTTCCCGCCACGGCCGCGAAGG
CCGCGATCCGCACGCTGGTTGCGCCGTCGCCCGGCGGCGCGCACGTGCTGTGCATCCCGTGGGCGGGCGCGAGCATCGAG
CGCTTCTTCGCGTGGAAGCGGCACCTGCCGGCGGGCGTCGGCTTGTCGGGCGTCCAGTTGCCGGGGCGCGGCGCGCGCGC
GCACGAGCCGTCGCCGACGGATCTCGTCGCGCTGCTCGACGAGATCGCGGCCGAGTACCTGGCGCTGCGCGACCCGCCGC
GCATCCTGTTCGGGCACAGCTTCGGCGCGCTGATCGCGTTCGAGATCGCGACGCGCGTGAGCCGGGCGGCCGGCCAGGCG
GGCGGCGATCCGTTCGTGCGGCTCGTCGTGTCGGGGCTGTCCGCGCCGAGCGTGATCGCCGAGGAAGAGCGCATCGCCCA
TCTCGACGACGACGCGTTCAGCGCGCAAGTGCACGCGCTCAACGGCATGCCGCCCGAAATCGCGCGCAGCCCCGAATCGC
TGCGCTATTTCATGACCGTCCTGCGCTGCGATTTCCGGCTGTACGAATCCTATGCGTTCGACGCGAATCGCCCGCCGCTG
CGCTGCCCGATCGCCGTGTGCTCCGGCCGCGACGATCCGAGCGTGTCGGAGCACGGGCTGAACGCGTGGGCGGCGCTCAC
GACGGGCGAGTGCCGGCGTCACGATTTCGACGGCGATCATTTCTTCATCGCGGACCACGCGGCCGCGATGCTGGGCCTCG
CGCTGGACGCCGAAAGCACGCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
GCGTCGCCGGACGGTCTGAACGTCTATCGGCGTCTCGGCTTTCGGCCGGTGTGCGAGTTTCGCGTGTATTCGAACCGCGC
CGCGGTTCTGGAGAGAAGTC

Downstream 100 bases:

>100_bases
GCGGCGCCGCCTTCCCTGCCTTTTTTCGAATCGTCATTTCCTGTCGACCACGTTCATGAGCGAGACCTCGAAGCGCCATC
CTTCCCTCGTGTTGATCCTG

Product: thioesterase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTSIPVRLDRFAPAADPADPAAPADLADLADLADLAAATDGAPAAAFPATAAKAAIRTLVAPSPGGAHVLCIPWAGASIE
RFFAWKRHLPAGVGLSGVQLPGRGARAHEPSPTDLVALLDEIAAEYLALRDPPRILFGHSFGALIAFEIATRVSRAAGQA
GGDPFVRLVVSGLSAPSVIAEEERIAHLDDDAFSAQVHALNGMPPEIARSPESLRYFMTVLRCDFRLYESYAFDANRPPL
RCPIAVCSGRDDPSVSEHGLNAWAALTTGECRRHDFDGDHFFIADHAAAMLGLALDAESTLAG

Sequences:

>Translated_303_residues
MTSIPVRLDRFAPAADPADPAAPADLADLADLADLAAATDGAPAAAFPATAAKAAIRTLVAPSPGGAHVLCIPWAGASIE
RFFAWKRHLPAGVGLSGVQLPGRGARAHEPSPTDLVALLDEIAAEYLALRDPPRILFGHSFGALIAFEIATRVSRAAGQA
GGDPFVRLVVSGLSAPSVIAEEERIAHLDDDAFSAQVHALNGMPPEIARSPESLRYFMTVLRCDFRLYESYAFDANRPPL
RCPIAVCSGRDDPSVSEHGLNAWAALTTGECRRHDFDGDHFFIADHAAAMLGLALDAESTLAG
>Mature_302_residues
TSIPVRLDRFAPAADPADPAAPADLADLADLADLAAATDGAPAAAFPATAAKAAIRTLVAPSPGGAHVLCIPWAGASIER
FFAWKRHLPAGVGLSGVQLPGRGARAHEPSPTDLVALLDEIAAEYLALRDPPRILFGHSFGALIAFEIATRVSRAAGQAG
GDPFVRLVVSGLSAPSVIAEEERIAHLDDDAFSAQVHALNGMPPEIARSPESLRYFMTVLRCDFRLYESYAFDANRPPLR
CPIAVCSGRDDPSVSEHGLNAWAALTTGECRRHDFDGDHFFIADHAAAMLGLALDAESTLAG

Specific function: Probable thioesterase involved in the biosynthesis of gramicidin S [H]

COG id: COG3208

COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase family [H]

Homologues:

Organism=Homo sapiens, GI89257335, Length=228, Percent_Identity=24.5614035087719, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI8922871, Length=202, Percent_Identity=24.7524752475248, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012223
- InterPro:   IPR001031 [H]

Pfam domain/function: PF00975 Thioesterase [H]

EC number: NA

Molecular weight: Translated: 31830; Mature: 31699

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIPVRLDRFAPAADPADPAAPADLADLADLADLAAATDGAPAAAFPATAAKAAIRTLV
CCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
APSPGGAHVLCIPWAGASIERFFAWKRHLPAGVGLSGVQLPGRGARAHEPSPTDLVALLD
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHH
EIAAEYLALRDPPRILFGHSFGALIAFEIATRVSRAAGQAGGDPFVRLVVSGLSAPSVIA
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
EEERIAHLDDDAFSAQVHALNGMPPEIARSPESLRYFMTVLRCDFRLYESYAFDANRPPL
HHHHHHHCCCCHHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RCPIAVCSGRDDPSVSEHGLNAWAALTTGECRRHDFDGDHFFIADHAAAMLGLALDAEST
CCEEEEECCCCCCCHHHCCCCEEEEECCCCHHCCCCCCCEEEEHHHHHHHHHHHCCCHHH
LAG
CCC
>Mature Secondary Structure 
TSIPVRLDRFAPAADPADPAAPADLADLADLADLAAATDGAPAAAFPATAAKAAIRTLV
CCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
APSPGGAHVLCIPWAGASIERFFAWKRHLPAGVGLSGVQLPGRGARAHEPSPTDLVALLD
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHH
EIAAEYLALRDPPRILFGHSFGALIAFEIATRVSRAAGQAGGDPFVRLVVSGLSAPSVIA
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
EEERIAHLDDDAFSAQVHALNGMPPEIARSPESLRYFMTVLRCDFRLYESYAFDANRPPL
HHHHHHHCCCCHHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RCPIAVCSGRDDPSVSEHGLNAWAALTTGECRRHDFDGDHFFIADHAAAMLGLALDAEST
CCEEEEECCCCCCCHHHCCCCEEEEECCCCHHCCCCCCCEEEEHHHHHHHHHHHCCCHHH
LAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2477357; 7512553 [H]