| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443843
Identifier: 126443843
GI number: 126443843
Start: 651440
End: 652720
Strand: Reverse
Name: 126443843
Synonym: BURPS668_A0680
Alternate gene names: NA
Gene position: 652720-651440 (Counterclockwise)
Preceding gene: 126444709
Following gene: 126442625
Centisome position: 20.87
GC content: 71.58
Gene sequence:
>1281_bases GTGTCTTTTTTACAAAAACGTCGACGGCGTTCGTTTCTCGCCTGTTGTCATTCGCGCGTCAAACGCGCATCATCTTCGCA CTTCGCACCGTCGCACACCTCGTGCGGACAGTCGTCAGAGGAGCCATCCCGGCCACCCGTACTCGAAAAATCCGTCGGCT GCGCGCAAACGCCGGATACGGCGACGCGCCCGCCGGCACATCGTGCATCCGGCCGCCGCGCGCACTCATCGATGAATCAC CTCCGAAACCTACTGGGCCATCTGAAGCATACCGATGACTTCGCCGCGTACCGGTTGCCGCACGACCTGATCGAGCGCGC GTGCCGGTACGGCTCGCTCGTGCGCGTCGAGCGCGGCGCGACGCTATGCGCGAGCGGCGCGCGCAGCGACGCGCTGTACG TCGTGCTCGACGGCGCCACCCGCTGCCTGCCGCATGCGCGCCTGCCGCTGCCGTGCGGCATCGATCACGGCCCCGGCACC TTCACGGGCGAGCTCGACCTGCTCAACGACGTCGGCTGCGAGGTCACGGTCGTCGCATCGTCCGCGTGCCGGCTCGCGCG GATCGAGCGTGCGACGCTCAGGCATCTGCTGCGGCGGGAGCCGGCGCTGCGCGACGTGCTCGTGCGCGTGTTCCTGCTGC GCCGCATCGGCGCGCTTGCGTCCGACGCCGCCGACACGCCGTTGCGCGAGCGTGGCGCCGAACCGGCATTCGACGTGGCG ATCGTCGGCAGCGGCGCGGCCGGCATGATCACCGCCGCGCATGCGGCGTCGCTGCGCCTGAACACCGTCGTCGCCGAAGG CCGGCTGCCGTTCGGGATCGACGACGAATTCGCGTCGGCCGCGCCGCCCGCATCGCCCGCGCCGCCCGCGCGCCGGCAAT TCGGTCCCTTTCTGACGCTGCGCGACCACACCGTCCGCCTCGACTGCGACGCCTATCCGTTCCGCCTCGTTACCCACGGC GGCGAGCGCCTGCGCGCGCATGCCGTCGTGATCGCGTCGTCGCTGCGGCCCGAGTACAGCCCGCGGCGCGCACGCGTCAC GCTGCGCGCGAATACCGAATGGCTCGACGGCGCCGTCGACGTCGACGACGACGGCTTCGTGCGCACCGGCCGCGCCGCGT CCGGCACGACGCTCGCCGCCGCATTCGAAAGCTCGCAGCCCGGCGTGTTCGCGATCGGCGCCGTGCGCGCGGGGCCGCGG CGCTCCGCGCTCGGCGAGCTCACGGAAGGCGCGGTCGTCGTCGACGCGATTCGCCGCTTCATCCGCGCGTCCGCCGTCTG A
Upstream 100 bases:
>100_bases CTCGGCGGTATGCTGGCTAAGGTGTCGGCGGGTCGCCCCATGGCAATTCCTTCAGTCGAGTCAAGGATAGAGGTCGATTG CATCCGTCGATAGAACAAAG
Downstream 100 bases:
>100_bases GCGGCGAGCGGCGGTGTGCGCTCCGCCGCTCACAGCGCATGCTCCAGCTTCCGCTCGTCGCCGAGGAACAGCGCGAACGC GATCAGCACGGGCGGCAGCG
Product: cyclic nucleotide regulated pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSFLQKRRRRSFLACCHSRVKRASSSHFAPSHTSCGQSSEEPSRPPVLEKSVGCAQTPDTATRPPAHRASGRRAHSSMNH LRNLLGHLKHTDDFAAYRLPHDLIERACRYGSLVRVERGATLCASGARSDALYVVLDGATRCLPHARLPLPCGIDHGPGT FTGELDLLNDVGCEVTVVASSACRLARIERATLRHLLRREPALRDVLVRVFLLRRIGALASDAADTPLRERGAEPAFDVA IVGSGAAGMITAAHAASLRLNTVVAEGRLPFGIDDEFASAAPPASPAPPARRQFGPFLTLRDHTVRLDCDAYPFRLVTHG GERLRAHAVVIASSLRPEYSPRRARVTLRANTEWLDGAVDVDDDGFVRTGRAASGTTLAAAFESSQPGVFAIGAVRAGPR RSALGELTEGAVVVDAIRRFIRASAV
Sequences:
>Translated_426_residues MSFLQKRRRRSFLACCHSRVKRASSSHFAPSHTSCGQSSEEPSRPPVLEKSVGCAQTPDTATRPPAHRASGRRAHSSMNH LRNLLGHLKHTDDFAAYRLPHDLIERACRYGSLVRVERGATLCASGARSDALYVVLDGATRCLPHARLPLPCGIDHGPGT FTGELDLLNDVGCEVTVVASSACRLARIERATLRHLLRREPALRDVLVRVFLLRRIGALASDAADTPLRERGAEPAFDVA IVGSGAAGMITAAHAASLRLNTVVAEGRLPFGIDDEFASAAPPASPAPPARRQFGPFLTLRDHTVRLDCDAYPFRLVTHG GERLRAHAVVIASSLRPEYSPRRARVTLRANTEWLDGAVDVDDDGFVRTGRAASGTTLAAAFESSQPGVFAIGAVRAGPR RSALGELTEGAVVVDAIRRFIRASAV >Mature_425_residues SFLQKRRRRSFLACCHSRVKRASSSHFAPSHTSCGQSSEEPSRPPVLEKSVGCAQTPDTATRPPAHRASGRRAHSSMNHL RNLLGHLKHTDDFAAYRLPHDLIERACRYGSLVRVERGATLCASGARSDALYVVLDGATRCLPHARLPLPCGIDHGPGTF TGELDLLNDVGCEVTVVASSACRLARIERATLRHLLRREPALRDVLVRVFLLRRIGALASDAADTPLRERGAEPAFDVAI VGSGAAGMITAAHAASLRLNTVVAEGRLPFGIDDEFASAAPPASPAPPARRQFGPFLTLRDHTVRLDCDAYPFRLVTHGG ERLRAHAVVIASSLRPEYSPRRARVTLRANTEWLDGAVDVDDDGFVRTGRAASGTTLAAAFESSQPGVFAIGAVRAGPRR SALGELTEGAVVVDAIRRFIRASAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45808; Mature: 45676
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLQKRRRRSFLACCHSRVKRASSSHFAPSHTSCGQSSEEPSRPPVLEKSVGCAQTPDT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ATRPPAHRASGRRAHSSMNHLRNLLGHLKHTDDFAAYRLPHDLIERACRYGSLVRVERGA CCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCEEEEECCC TLCASGARSDALYVVLDGATRCLPHARLPLPCGIDHGPGTFTGELDLLNDVGCEVTVVAS EEECCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCEEEEEEC SACRLARIERATLRHLLRREPALRDVLVRVFLLRRIGALASDAADTPLRERGAEPAFDVA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEE IVGSGAAGMITAAHAASLRLNTVVAEGRLPFGIDDEFASAAPPASPAPPARRQFGPFLTL EECCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCEEEE RDHTVRLDCDAYPFRLVTHGGERLRAHAVVIASSLRPEYSPRRARVTLRANTEWLDGAVD ECCEEEEECCCCCEEEEECCCHHHHHHHEEEEHHCCCCCCCCEEEEEEEECCCCCCCCEE VDDDGFVRTGRAASGTTLAAAFESSQPGVFAIGAVRAGPRRSALGELTEGAVVVDAIRRF CCCCCCEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH IRASAV HHHCCC >Mature Secondary Structure SFLQKRRRRSFLACCHSRVKRASSSHFAPSHTSCGQSSEEPSRPPVLEKSVGCAQTPDT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ATRPPAHRASGRRAHSSMNHLRNLLGHLKHTDDFAAYRLPHDLIERACRYGSLVRVERGA CCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCEEEEECCC TLCASGARSDALYVVLDGATRCLPHARLPLPCGIDHGPGTFTGELDLLNDVGCEVTVVAS EEECCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCEEEEEEC SACRLARIERATLRHLLRREPALRDVLVRVFLLRRIGALASDAADTPLRERGAEPAFDVA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEE IVGSGAAGMITAAHAASLRLNTVVAEGRLPFGIDDEFASAAPPASPAPPARRQFGPFLTL EECCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCEEEE RDHTVRLDCDAYPFRLVTHGGERLRAHAVVIASSLRPEYSPRRARVTLRANTEWLDGAVD ECCEEEEECCCCCEEEEECCCHHHHHHHEEEEHHCCCCCCCCEEEEEEEECCCCCCCCEE VDDDGFVRTGRAASGTTLAAAFESSQPGVFAIGAVRAGPRRSALGELTEGAVVVDAIRRF CCCCCCEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHH IRASAV HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA