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The map label for this gene is ybiU [H]

Identifier: 126443623

GI number: 126443623

Start: 2380634

End: 2381878

Strand: Reverse

Name: ybiU [H]

Synonym: BURPS668_A2463

Alternate gene names: 126443623

Gene position: 2381878-2380634 (Counterclockwise)

Preceding gene: 126445150

Following gene: 126445333

Centisome position: 76.16

GC content: 71.65

Gene sequence:

>1245_bases
ATGCCGTTCCCCATCGACGACCTGCCGGCGGCGATCCGCACGACCAAAGCGGTGCTGCGCGCCGCGATGCCGAATCGCGC
GCCGGTGTTCCGCGCGCTCGAGGGCGACATCGCGCGGCAGGCCGATGCGATCCTGACCGATCGCGCGCAGGGCCGCGACA
CGATTCCCGTGCTGCGCTTCGCGGACATCGCCGCCGATCGCGTCGATCCGGCGTCGCTCGCCGCATTGAGGACGCGCGGC
GCGTGCGTGATCCGCGGCGTGTTCGACGCGCGGCAGGCGAGCGACTGGAACGACGAGATCGCTGCATACGTCGAGGCGAA
CCGGCTCGACGACAAGCTCGCCCGTCGCGCCGAAGACCGCTATTTCGGCACGCTCGCGTCGAGCCGGCCGCAGATCTACG
GCATCTACTGGTCGAAGCCGCAGATCGCCGCGCGCCAGTCGCCCGCGCTCACGCAGGCGCGCGTGTTCCTGAACCGGCTG
TGGCGTGCGCAAAGCGAGGGGCGCGTGCATTTCGACCCGGCGCGCGCGCCGGCCTATGCGGACCGCATTCGCCGCCGGCC
GCCGGGCTCGTCGTCGCTCGGGCTGTCGCCGCACGTCGACGGCGGCTCCGTCGAGCGCTGGCTCGAGCCGAACTACCGGC
GCGTGTATCGGCACGTGCTGGCGGGCGACTGGCGCGCATACGATCCGTTCGACGCGGCGTTCCGGCCCGACGTCGAGGAG
ATTCCGTCACCCGCCGTCTGCTCGATGTTCCGCACGTTCCAGGGCTGGACCGCGCTCACGCCGCAAGGGCCGGGCGACGG
CACGCTGCAACTGATCCCGGTGGCGAACGCGATGGCGTACGTCGTGCTGCGCGCGCTGCAGGACGACGTGCCCGACGACG
ACCTGTGCGGCGCGCAGCCGGGGCGCGCGCTGTCGGTGTTGCCGGCGTGGCACGCGCCGCTGCTCGCCGCGCTCGTGCCG
ATTCCGCCGATGGAGCCGGGCGACGCGGTGTTCTGGCACGGCGATGTCGTGCACGCGGTCGAGGATGCGCATCGCGGAAC
CGGTTACAGCAACGTGATGTACATCGCGTCGGCGCCGGGGTGCGCGAAGAACGACGCATACCTGAAGCGTCAACTGCCGA
GCTTCCTGCGCGGCGAGAGTCCGCCGGATTTTCCGGCGGACCACTTCGAGACGGATTTCGCCGGACGCGCGCGGGCGGAC
GATCTGAGCGCGCTGGGGCGCGAGCAGATGGGCTTCGGGCCGTGA

Upstream 100 bases:

>100_bases
GGCGCGATTGTATCGCTTCGAACGGACCGGGGGATCTACGCTGAACGGGTGCGTCCAGGTACGCCACGCTCATCCGGAAA
CCCGATCGAGGAGACATCCG

Downstream 100 bases:

>100_bases
ATCGCGGCCGAGGGGCGGGCGCCGCCGACATGCGCGGGGGGGCGCCGCCCGCTCCGCGCCGTTTGTCGTCGCGGTGCGCC
GGCTTGCGCGCGATGAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MPFPIDDLPAAIRTTKAVLRAAMPNRAPVFRALEGDIARQADAILTDRAQGRDTIPVLRFADIAADRVDPASLAALRTRG
ACVIRGVFDARQASDWNDEIAAYVEANRLDDKLARRAEDRYFGTLASSRPQIYGIYWSKPQIAARQSPALTQARVFLNRL
WRAQSEGRVHFDPARAPAYADRIRRRPPGSSSLGLSPHVDGGSVERWLEPNYRRVYRHVLAGDWRAYDPFDAAFRPDVEE
IPSPAVCSMFRTFQGWTALTPQGPGDGTLQLIPVANAMAYVVLRALQDDVPDDDLCGAQPGRALSVLPAWHAPLLAALVP
IPPMEPGDAVFWHGDVVHAVEDAHRGTGYSNVMYIASAPGCAKNDAYLKRQLPSFLRGESPPDFPADHFETDFAGRARAD
DLSALGREQMGFGP

Sequences:

>Translated_414_residues
MPFPIDDLPAAIRTTKAVLRAAMPNRAPVFRALEGDIARQADAILTDRAQGRDTIPVLRFADIAADRVDPASLAALRTRG
ACVIRGVFDARQASDWNDEIAAYVEANRLDDKLARRAEDRYFGTLASSRPQIYGIYWSKPQIAARQSPALTQARVFLNRL
WRAQSEGRVHFDPARAPAYADRIRRRPPGSSSLGLSPHVDGGSVERWLEPNYRRVYRHVLAGDWRAYDPFDAAFRPDVEE
IPSPAVCSMFRTFQGWTALTPQGPGDGTLQLIPVANAMAYVVLRALQDDVPDDDLCGAQPGRALSVLPAWHAPLLAALVP
IPPMEPGDAVFWHGDVVHAVEDAHRGTGYSNVMYIASAPGCAKNDAYLKRQLPSFLRGESPPDFPADHFETDFAGRARAD
DLSALGREQMGFGP
>Mature_413_residues
PFPIDDLPAAIRTTKAVLRAAMPNRAPVFRALEGDIARQADAILTDRAQGRDTIPVLRFADIAADRVDPASLAALRTRGA
CVIRGVFDARQASDWNDEIAAYVEANRLDDKLARRAEDRYFGTLASSRPQIYGIYWSKPQIAARQSPALTQARVFLNRLW
RAQSEGRVHFDPARAPAYADRIRRRPPGSSSLGLSPHVDGGSVERWLEPNYRRVYRHVLAGDWRAYDPFDAAFRPDVEEI
PSPAVCSMFRTFQGWTALTPQGPGDGTLQLIPVANAMAYVVLRALQDDVPDDDLCGAQPGRALSVLPAWHAPLLAALVPI
PPMEPGDAVFWHGDVVHAVEDAHRGTGYSNVMYIASAPGCAKNDAYLKRQLPSFLRGESPPDFPADHFETDFAGRARADD
LSALGREQMGFGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787042, Length=416, Percent_Identity=45.4326923076923, Blast_Score=367, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010856 [H]

Pfam domain/function: PF07350 DUF1479 [H]

EC number: NA

Molecular weight: Translated: 45501; Mature: 45370

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPIDDLPAAIRTTKAVLRAAMPNRAPVFRALEGDIARQADAILTDRAQGRDTIPVLRF
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ADIAADRVDPASLAALRTRGACVIRGVFDARQASDWNDEIAAYVEANRLDDKLARRAEDR
HHHHHCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YFGTLASSRPQIYGIYWSKPQIAARQSPALTQARVFLNRLWRAQSEGRVHFDPARAPAYA
HHHHHHCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH
DRIRRRPPGSSSLGLSPHVDGGSVERWLEPNYRRVYRHVLAGDWRAYDPFDAAFRPDVEE
HHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
IPSPAVCSMFRTFQGWTALTPQGPGDGTLQLIPVANAMAYVVLRALQDDVPDDDLCGAQP
CCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
GRALSVLPAWHAPLLAALVPIPPMEPGDAVFWHGDVVHAVEDAHRGTGYSNVMYIASAPG
CCEEEECCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCC
CAKNDAYLKRQLPSFLRGESPPDFPADHFETDFAGRARADDLSALGREQMGFGP
CCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCHHHCCCCC
>Mature Secondary Structure 
PFPIDDLPAAIRTTKAVLRAAMPNRAPVFRALEGDIARQADAILTDRAQGRDTIPVLRF
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ADIAADRVDPASLAALRTRGACVIRGVFDARQASDWNDEIAAYVEANRLDDKLARRAEDR
HHHHHCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YFGTLASSRPQIYGIYWSKPQIAARQSPALTQARVFLNRLWRAQSEGRVHFDPARAPAYA
HHHHHHCCCCEEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH
DRIRRRPPGSSSLGLSPHVDGGSVERWLEPNYRRVYRHVLAGDWRAYDPFDAAFRPDVEE
HHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
IPSPAVCSMFRTFQGWTALTPQGPGDGTLQLIPVANAMAYVVLRALQDDVPDDDLCGAQP
CCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
GRALSVLPAWHAPLLAALVPIPPMEPGDAVFWHGDVVHAVEDAHRGTGYSNVMYIASAPG
CCEEEECCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCC
CAKNDAYLKRQLPSFLRGESPPDFPADHFETDFAGRARADDLSALGREQMGFGP
CCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]