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The map label for this gene is bkdR [H]

Identifier: 126445333

GI number: 126445333

Start: 2376969

End: 2377577

Strand: Reverse

Name: bkdR [H]

Synonym: BURPS668_A2461

Alternate gene names: 126445333

Gene position: 2377577-2376969 (Counterclockwise)

Preceding gene: 126443623

Following gene: 126445463

Centisome position: 76.02

GC content: 62.89

Gene sequence:

>609_bases
GTGCATCTCTTTTGGTTGGAATTTTGGTTTCGAGTAACGTATAAATTCCTGAAAAATCGTCATTTTCGGAATGTTTGCAC
TATGAGCGCACCTTCCCGCCGGCTGGACCGGATCGACATCGGCATCCTCAACCAACTGCAGCAGAACGCGCGGATCACGA
ACGCCGAGCTCGCGCGCGCGGTGAACCTGTCGCCGACGCCGTGCTTCAACCGCGTGCGCGCGCTCGAGAGGCTCGGCCTC
ATCAAGCAGCAGGTGACGCTGCTCGATCCGCAGCCGCTCGGGCTGCGCATCAACGTGTTCATTCAGGTGAGCCTCGAGAA
GCAGGCCGAGGACGCGCTGCGCCGCTTCGAGGAGGCGATCGACAAGCGTCCCGAGGTGATGGAGTGCTATCTGATGTCGG
GCGACGCCGATTACCTGCTGCGCGTCGTCGTGCCGAGCATGAAGAGCCTCGAGCGCTTCATCCTCGATCAGCTGACGACG
ATTCCGGGCGTGTCGAACATCCGGTCGAGCTTCGCGTTGAAGCAGGTCCGCTACCGGACCGCGCTGCCGCTGCCGGCGGA
CGGGCTCACGCTCGCCGACGCCGACGACGCGCCGCAGGAGTGGGTGTGA

Upstream 100 bases:

>100_bases
TCCGTTCGATAAATCGTTCATGCGCGGCTCCGGGCGGGCGGGTTCGTGGGGGCGGCTGAGGCGGCAACAGCCATCAAGGT
TATCCATCGAGCCGCAGAAT

Downstream 100 bases:

>100_bases
GCGAAGCGTTCGCGGCCCGGTCGCGCCGCGCGATGCGCGCACACTGTCCGCCGCGTTGCGACCTCATGCCGCACGGCCGG
GCGCCGCTGCGATGCGGGAT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHLFWLEFWFRVTYKFLKNRHFRNVCTMSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALERLGL
IKQQVTLLDPQPLGLRINVFIQVSLEKQAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTT
IPGVSNIRSSFALKQVRYRTALPLPADGLTLADADDAPQEWV

Sequences:

>Translated_202_residues
MHLFWLEFWFRVTYKFLKNRHFRNVCTMSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALERLGL
IKQQVTLLDPQPLGLRINVFIQVSLEKQAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTT
IPGVSNIRSSFALKQVRYRTALPLPADGLTLADADDAPQEWV
>Mature_202_residues
MHLFWLEFWFRVTYKFLKNRHFRNVCTMSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALERLGL
IKQQVTLLDPQPLGLRINVFIQVSLEKQAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTT
IPGVSNIRSSFALKQVRYRTALPLPADGLTLADADDAPQEWV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=153, Percent_Identity=41.8300653594771, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=38, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790182, Length=152, Percent_Identity=30.2631578947368, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 23329; Mature: 23329

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLFWLEFWFRVTYKFLKNRHFRNVCTMSAPSRRLDRIDIGILNQLQQNARITNAELARA
CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VNLSPTPCFNRVRALERLGLIKQQVTLLDPQPLGLRINVFIQVSLEKQAEDALRRFEEAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHH
DKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTTIPGVSNIRSSFALKQVRYRT
HCCCCCEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALPLPADGLTLADADDAPQEWV
CCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MHLFWLEFWFRVTYKFLKNRHFRNVCTMSAPSRRLDRIDIGILNQLQQNARITNAELARA
CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VNLSPTPCFNRVRALERLGLIKQQVTLLDPQPLGLRINVFIQVSLEKQAEDALRRFEEAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHH
DKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTTIPGVSNIRSSFALKQVRYRT
HCCCCCEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALPLPADGLTLADADDAPQEWV
CCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]