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The map label for this gene is amaB [H]

Identifier: 126442666

GI number: 126442666

Start: 1715614

End: 1717029

Strand: Reverse

Name: amaB [H]

Synonym: BURPS668_A1769

Alternate gene names: 126442666

Gene position: 1717029-1715614 (Counterclockwise)

Preceding gene: 126443468

Following gene: 126444797

Centisome position: 54.9

GC content: 73.8

Gene sequence:

>1416_bases
GTGGGGGAAATTGACGGTAGGCGGCTCTGGAACAGCCTGACGGAACTCGCGCGAATCGGCGGCACCGCGCGCGGCGGCGT
GCGCCGGCTCGCGCTGACCGAGGCCGACCGGCGCGGCCGCGAACGCTTCGCGCAATGGTGTCGCGACGCGGGGATGGCGG
TGCGCGTCGATGCGATCGGCAATCTGTTCGCCCGGCGCGCCGGCGCGGACGACACGCAGCCGGCCGTGCTCGTCGGCAGT
CATCTCGACACGCAGCCCGAAGGGGGGCGCTTCGACGGCGCGTACGGCGTGCTCGCCGGGCTCGAGCTCGTGCGCACGCT
GAACGATCGCGGGATCGTCACCGGCAAGCCGATCGAGATCGTATCGTGGACCAACGAGGAGGGCGCGCGCTTCACGCCGG
CGATGCTCGGCTCGGCGGTGTTTACCGGCGCATTGCCGCTCGACGCGGCGCTCGCCGCGCGCGATGCGGACGGCATCGCG
CTTGCCGAAGCGCTCGAAGCGTGCGGCTATCGCGATGCGCTGCGCTCGGCGTGGATGCGCGGCGCGCACGGGGCGCGCGG
CCTGGAGCCGGCGCTCGCGCCGCTGCACGAGCGCGTCGATGCGTACTTCGAGGCGCATATCGAGCAGGGCCCGGTGCTGG
AGCGGCACGGCGCGACGATCGGCGTCGTCACGGGCGGGCAGGCGATCCGCTGGCTCGACGCGACGGTCACGGGTGCGGCC
GCGCATGCCGGCACGACGCCGATGCCGTACCGCAAGGACGCGCTGTTCGCGAGCGCCGAGCTCGCGCTCGCGATCGAGGC
GCTCGTCGCGCGCCATGCGCCCGACGCGCTCGCGACGATCGGGCAGAGCGCGATCGACAACGCGTCGCGCAACACGATCG
CCGAGCGCGTCACGTTCAGCATCGATCTTCGCCATCCCGACGACGCGCGGCTCGACGCGATCGAGCGCGAGCTGCGCCGC
GTGTGCGCGCAAATCGCCGGGCGACGCGGCGTCGCGGTCGACATCAGCCGGCACTGGTCGAGCCCGGCGACGCCGTTCGA
TCCGGCATGCATCGCGCTCGTCGAGGCGGCCGCGCGCGGCGGCGGCTATGCGCACGAGCGAATCGTGAGCGGCGCCGGGC
ACGATGCGGTTCATCTCGCGCGCTGCGTGCCGAGCGCGATGGTGTTCATTCCGTGCGTCGGCGGGCTGTCGCACAACGCA
GCCGAGCGTGCGTTGCCCGAGCACGTCGAGGCGGGCGCGAACGTGCTGCTCGGCGCGGTGCTCGCGCGCGCCGGCGTGCG
CGAGCGGGCGGCGCATCGGCGCGCTCGCCGCGCCCGGCGCCGGCGATGCAGGCCGCGCATTCGGGCACGGATGCGGGCAC
CTTCGCGCAGCCGCATTGACCGATCGATCGTGGAGCGAAGCGACCCCGCATGCTGA

Upstream 100 bases:

>100_bases
GCTCGGCGGCGTGATCGCGCTCGACGCGCGCCGCCATCGGCGGGCCGACGTCGCCGACGCCGTGCTCACGCGCTGATTCA
GGAAAAGGAGGGAGATCTCG

Downstream 100 bases:

>100_bases
CTTATTTTCATCCGGACCAACTGAAGCACAGTCCGCTCACTTATCTGTCGCGCGGCAAGATGCGCGCGCCGCACGAAGTG
CCCGAGCGGGCCGTGCGGCT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MGEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGS
HLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIA
LAEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRR
VCAQIAGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNA
AERALPEHVEAGANVLLGAVLARAGVRERAAHRRARRARRRRCRPRIRARMRAPSRSRIDRSIVERSDPAC

Sequences:

>Translated_471_residues
MGEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGS
HLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIA
LAEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRR
VCAQIAGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNA
AERALPEHVEAGANVLLGAVLARAGVRERAAHRRARRARRRRCRPRIRARMRAPSRSRIDRSIVERSDPAC
>Mature_470_residues
GEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGSH
LDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIAL
AEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAAA
HAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRRV
CAQIAGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNAA
ERALPEHVEAGANVLLGAVLARAGVRERAAHRRARRARRRRCRPRIRARMRAPSRSRIDRSIVERSDPAC

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=411, Percent_Identity=31.1435523114355, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 50352; Mature: 50221

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIG
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
NLFARRAGADDTQPAVLVGSHLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEI
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
VSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIALAEALEACGYRDALRSAWMR
EEECCCCCCEECHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
GAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECCCEEEEEHHHHHCHH
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEEE
IDLRHPDDARLDAIERELRRVCAQIAGRRGVAVDISRHWSSPATPFDPACIALVEAAARG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCC
GGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNAAERALPEHVEAGANVLLGAV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAGVRERAAHRRARRARRRRCRPRIRARMRAPSRSRIDRSIVERSDPAC
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIG
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
NLFARRAGADDTQPAVLVGSHLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEI
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
VSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIALAEALEACGYRDALRSAWMR
EEECCCCCCEECHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
GAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECCCEEEEEHHHHHCHH
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHEEEE
IDLRHPDDARLDAIERELRRVCAQIAGRRGVAVDISRHWSSPATPFDPACIALVEAAARG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCC
GGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNAAERALPEHVEAGANVLLGAV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAGVRERAAHRRARRARRRRCRPRIRARMRAPSRSRIDRSIVERSDPAC
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]