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The map label for this gene is fliP [H]

Identifier: 126442614

GI number: 126442614

Start: 199699

End: 200466

Strand: Reverse

Name: fliP [H]

Synonym: BURPS668_A0216

Alternate gene names: 126442614

Gene position: 200466-199699 (Counterclockwise)

Preceding gene: 126444393

Following gene: 126445424

Centisome position: 6.41

GC content: 65.36

Gene sequence:

>768_bases
ATGACGCGGCTGCGGTTCCGGGCCGCGCGGCTTGCGACGGCGCTGACCGCCGCGGCCGCCCTGAGCGCGATCACCGCCAC
GCCCGCGCTGGCCGAGCCGCTCAAGCTGCCGCTCGAATCGCTCGGCTTGCGTGGCGATTACAGCGTCAAGACGCAAATCC
TGCTGTTCATGACGCTGCTCGGGCTGTTGCCGGCCCTCGCGATCGTGATGACGAGCTTTCTTCGCTTCGCCATCGTGCTC
GCGCTGCTCCGGCAGGCGCTCGGGCTGCAGCAGGGACTGCCGGCTCGCGTCATCACGGGCGTCGCGCTGCTCCTGACCCT
GCTCGTCATGCGCCCCGTCGGGCTCGACGTCTGGCGCCATGCGATCGAGCCCTATGATCGCGACGAGATCACGTTCCGCG
AAGCGATCGCGCGTGCGGAACAGCCGGTCTCGCGCTTCATGCTCGCGCAGACCAGCAAGGCCAGTCTCGAACAGATTTCG
CGGCTGTCCGGCGAGCGCGATGTCGCGAAGCCGGAGGATCACGCATTCGTCGTGAAGGCCGCGGCGTTCATGATGAGCGA
GCTCAAGACGGCGTTTCAGATCGGCGCGATGTTGTTCCTGCCGTTTCTGATCATCGATCTGGTCGTTGCTTCGACGCTGA
TGGCGATGGGCATGATGATGCTGTCGCCCCTCGTCATCTCGCTGCCGCTCAAGCTGCTCCTGTTCGTTCTCGTGGACGGC
TGGACCTTGACCGTCAACACCCTGACCACCAGTATCCAGGCTTACTGA

Upstream 100 bases:

>100_bases
AGGTCAACGGCACGACCGTCGGCCACGCGGAAGTCGTCGTGTCCGGCGAGAACTACGGGCTCAAGATCATCGATCTCGAG
AACCTCGGAGATTTTGCGCC

Downstream 100 bases:

>100_bases
TGCTTACCTCCGATCTCGCCGTCGAACTCGTCGGCAATGCGATCCGGCTCGTCACTCTGATGGTCGCCGTCATCATCGCC
CCCGGGCTGCTGGTTGGGCT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTRLRFRAARLATALTAAAALSAITATPALAEPLKLPLESLGLRGDYSVKTQILLFMTLLGLLPALAIVMTSFLRFAIVL
ALLRQALGLQQGLPARVITGVALLLTLLVMRPVGLDVWRHAIEPYDRDEITFREAIARAEQPVSRFMLAQTSKASLEQIS
RLSGERDVAKPEDHAFVVKAAAFMMSELKTAFQIGAMLFLPFLIIDLVVASTLMAMGMMMLSPLVISLPLKLLLFVLVDG
WTLTVNTLTTSIQAY

Sequences:

>Translated_255_residues
MTRLRFRAARLATALTAAAALSAITATPALAEPLKLPLESLGLRGDYSVKTQILLFMTLLGLLPALAIVMTSFLRFAIVL
ALLRQALGLQQGLPARVITGVALLLTLLVMRPVGLDVWRHAIEPYDRDEITFREAIARAEQPVSRFMLAQTSKASLEQIS
RLSGERDVAKPEDHAFVVKAAAFMMSELKTAFQIGAMLFLPFLIIDLVVASTLMAMGMMMLSPLVISLPLKLLLFVLVDG
WTLTVNTLTTSIQAY
>Mature_254_residues
TRLRFRAARLATALTAAAALSAITATPALAEPLKLPLESLGLRGDYSVKTQILLFMTLLGLLPALAIVMTSFLRFAIVLA
LLRQALGLQQGLPARVITGVALLLTLLVMRPVGLDVWRHAIEPYDRDEITFREAIARAEQPVSRFMLAQTSKASLEQISR
LSGERDVAKPEDHAFVVKAAAFMMSELKTAFQIGAMLFLPFLIIDLVVASTLMAMGMMMLSPLVISLPLKLLLFVLVDGW
TLTVNTLTTSIQAY

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=238, Percent_Identity=44.1176470588235, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27836; Mature: 27705

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLRFRAARLATALTAAAALSAITATPALAEPLKLPLESLGLRGDYSVKTQILLFMTLL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHH
GLLPALAIVMTSFLRFAIVLALLRQALGLQQGLPARVITGVALLLTLLVMRPVGLDVWRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AIEPYDRDEITFREAIARAEQPVSRFMLAQTSKASLEQISRLSGERDVAKPEDHAFVVKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAFMMSELKTAFQIGAMLFLPFLIIDLVVASTLMAMGMMMLSPLVISLPLKLLLFVLVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WTLTVNTLTTSIQAY
CEEEHHHHHHHHHCC
>Mature Secondary Structure 
TRLRFRAARLATALTAAAALSAITATPALAEPLKLPLESLGLRGDYSVKTQILLFMTLL
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHH
GLLPALAIVMTSFLRFAIVLALLRQALGLQQGLPARVITGVALLLTLLVMRPVGLDVWRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AIEPYDRDEITFREAIARAEQPVSRFMLAQTSKASLEQISRLSGERDVAKPEDHAFVVKA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAFMMSELKTAFQIGAMLFLPFLIIDLVVASTLMAMGMMMLSPLVISLPLKLLLFVLVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WTLTVNTLTTSIQAY
CEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]