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The map label for this gene is fliQ [H]

Identifier: 126445424

GI number: 126445424

Start: 199427

End: 199699

Strand: Reverse

Name: fliQ [H]

Synonym: BURPS668_A0215

Alternate gene names: 126445424

Gene position: 199699-199427 (Counterclockwise)

Preceding gene: 126442614

Following gene: 126443144

Centisome position: 6.39

GC content: 63.74

Gene sequence:

>273_bases
ATGCTTACCTCCGATCTCGCCGTCGAACTCGTCGGCAATGCGATCCGGCTCGTCACTCTGATGGTCGCCGTCATCATCGC
CCCCGGGCTGCTGGTTGGGCTGGTCGTCGCGTTGTTTCAGGCCGCGACCCAGATCAACGAGCAGACGCTCAGCTTCCTGC
CGCGCCTGCTGGCGACGCTGGCGATACTCGTGCTGGCAGGGCACTGGCTCGTACAGACACTGATGGATTACTGCGTCGCA
ACCTTCACGCGCGCGGCACAACTGGTCGGCTGA

Upstream 100 bases:

>100_bases
CCCTCGTCATCTCGCTGCCGCTCAAGCTGCTCCTGTTCGTTCTCGTGGACGGCTGGACCTTGACCGTCAACACCCTGACC
ACCAGTATCCAGGCTTACTG

Downstream 100 bases:

>100_bases
CGGGATGGACGCCATCGTCGCCGCCGCTGCCGAGTGGCTCGCACGGGCATGGTGGCCGTTCTGCCGGATTCTCGCCGCGT
TGAGCGCAGCGCCGTTCATC

Product: flagellar biosynthetic protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLTSDLAVELVGNAIRLVTLMVAVIIAPGLLVGLVVALFQAATQINEQTLSFLPRLLATLAILVLAGHWLVQTLMDYCVA
TFTRAAQLVG

Sequences:

>Translated_90_residues
MLTSDLAVELVGNAIRLVTLMVAVIIAPGLLVGLVVALFQAATQINEQTLSFLPRLLATLAILVLAGHWLVQTLMDYCVA
TFTRAAQLVG
>Mature_90_residues
MLTSDLAVELVGNAIRLVTLMVAVIIAPGLLVGLVVALFQAATQINEQTLSFLPRLLATLAILVLAGHWLVQTLMDYCVA
TFTRAAQLVG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9561; Mature: 9561

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSDLAVELVGNAIRLVTLMVAVIIAPGLLVGLVVALFQAATQINEQTLSFLPRLLATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILVLAGHWLVQTLMDYCVATFTRAAQLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTSDLAVELVGNAIRLVTLMVAVIIAPGLLVGLVVALFQAATQINEQTLSFLPRLLATL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILVLAGHWLVQTLMDYCVATFTRAAQLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]