| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126442569
Identifier: 126442569
GI number: 126442569
Start: 1493868
End: 1495397
Strand: Reverse
Name: 126442569
Synonym: BURPS668_A1560
Alternate gene names: NA
Gene position: 1495397-1493868 (Counterclockwise)
Preceding gene: 126445131
Following gene: 126445204
Centisome position: 47.82
GC content: 69.8
Gene sequence:
>1530_bases ATGGAACTGACGCCCGCGCCGCGCGCCGGCATGCGCGCGCATCGACAAACACCAAGACAAGCGCATCGTTTCGCACGCGT CATTCGACAAGGAACCATCATGCGTCGCCTCTTGTGCTGCTTCACGATCGTTCTGGGCTTCCTGTTCGCCGCGCCGTCGC ACGCGGGCGACGCGGCCGCCGTTGGGCAACTGACGGTGGCGCTGTATCCGTGGGTGCCGCGCGTCGACCAGTTCAAGCGC GCGATCGAAACCGAATGGAAGAAGGCGCAGCCGGGCGTCGCGCTGCGGTTCGTGTCCGCGCACGCGTGGGACGGCGGCTA CCGGAACGATCCGCCCGCGAGCGCCGACGTCTACGTGTACGACGCGATCTTCCTCGACTATTTCCGCAGCCAGAACTGGC TCGAGCCGCTCGCGGCGGACGAGATCCAGCACATCGACGATTTCCTGCCGTACGCGATCCAGGGCGTGAAGGCGGGCGAC CGGTACTACAGCATCCCGCAGCTCGGCTGCGCGAACGTGCTGTTCTACCGGAAGGACGACGCGGCGCTCGCGGCCGCGAC GACGCTCACGCAGGTGCGCGGCGCGCTCGAGCAATGCACGTTCACGAGCGAGATCCCGCCGGACAGGCGCGGGCTGATGG TCGACATGTCCGGGCGCACGACGAACGCCGCGCTCTATCTGGACGCCGCGCACAGCCGCACGGGCGCATACCCGCTGCCG CTGCCGTGGAACGCGAACGACCTGAACGGCGAAGCGCTCGGCAGCCTGCGCGCGCTGATGGCGATGTCGAGCTGGCCGAA CGCGACGGCCGAGCTGCCCGGCCAGTACGATCGCTCGGTATGGTTCAGCGACGGCGAAGGGCGCGCGGTGATCGGCTATT CGGAATCGATGTCGGCGATGAGCGAGGCGGCGCGGCGCGATCTCGACTTCAAGTTCCTGCCGCTGTCGGACACGCCGCAG CCGCCGCTCTTCTACGCGGACGTGATCGGCGTGAACACGACGACCCACGCGCGCGGCACGCGCGCGCTCGCGGTGCAACT CGCGAACGTGATCGCCGCATCGTCGACGATGGTGCAAAGCGTCGGGCCGGACGGCAGCGGCGTGCCGCAATATCTGTTCT CCGCGCGGCGCAGCGTGCTGCACACGCTCGCGCAGCGCTATCCGCTCTATCGGAAGATGGTCGCGCTGCTGGATGCGCGC GAGCCGGTGATGTTCAAGATCGATGCGCAGTCGCGCAACTGGCTCGCCTCGATGAGCGGGCCGATCGCGCAGCGCGCGCG CGCCGATTACCCGTGCGGCTGCGATATCGACACCGCGCTGCCGATCGCCGACTATCGCGGCGCGCAGGCCGTGTGCCCGA CCGTCTGCGCGGCGCAGGGCGGCTGGAACGGCCAGTGGACCAATCAGTCTCCCGCGGCGCCCGCCGGGCAGTCGGCGTGC GGCTGCAACGCGTGCCCGACGTCAGCCGCGGCGAAGCTGCCGCGCGCGCTCGCCACCCGCGCCGCGCCCGGCGATCGCGC GAAGCCGTGA
Upstream 100 bases:
>100_bases GCGTCTGCCAAGCCAAGGCTTACCTGAGCGACGCGCTCGCCGCGTCGGGCGAGCTCGAGGTCGGTCGCGGGCACGGCCCG GTCCATCATTTCCACGCGCT
Downstream 100 bases:
>100_bases CACGGGCGGCGCCCGGCCTCGCCGCGGGCCGGGCCGGGCGCCCGGCCCGCGAGGCCCGCGCCGCGCCCGAATCGCCTCGC GCGCGGTCGAACGCGGTTGC
Product: putative thiaminase I
Products: NA
Alternate protein names: Thiaminase I; Thiamine pyridinylase [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MELTPAPRAGMRAHRQTPRQAHRFARVIRQGTIMRRLLCCFTIVLGFLFAAPSHAGDAAAVGQLTVALYPWVPRVDQFKR AIETEWKKAQPGVALRFVSAHAWDGGYRNDPPASADVYVYDAIFLDYFRSQNWLEPLAADEIQHIDDFLPYAIQGVKAGD RYYSIPQLGCANVLFYRKDDAALAAATTLTQVRGALEQCTFTSEIPPDRRGLMVDMSGRTTNAALYLDAAHSRTGAYPLP LPWNANDLNGEALGSLRALMAMSSWPNATAELPGQYDRSVWFSDGEGRAVIGYSESMSAMSEAARRDLDFKFLPLSDTPQ PPLFYADVIGVNTTTHARGTRALAVQLANVIAASSTMVQSVGPDGSGVPQYLFSARRSVLHTLAQRYPLYRKMVALLDAR EPVMFKIDAQSRNWLASMSGPIAQRARADYPCGCDIDTALPIADYRGAQAVCPTVCAAQGGWNGQWTNQSPAAPAGQSAC GCNACPTSAAAKLPRALATRAAPGDRAKP
Sequences:
>Translated_509_residues MELTPAPRAGMRAHRQTPRQAHRFARVIRQGTIMRRLLCCFTIVLGFLFAAPSHAGDAAAVGQLTVALYPWVPRVDQFKR AIETEWKKAQPGVALRFVSAHAWDGGYRNDPPASADVYVYDAIFLDYFRSQNWLEPLAADEIQHIDDFLPYAIQGVKAGD RYYSIPQLGCANVLFYRKDDAALAAATTLTQVRGALEQCTFTSEIPPDRRGLMVDMSGRTTNAALYLDAAHSRTGAYPLP LPWNANDLNGEALGSLRALMAMSSWPNATAELPGQYDRSVWFSDGEGRAVIGYSESMSAMSEAARRDLDFKFLPLSDTPQ PPLFYADVIGVNTTTHARGTRALAVQLANVIAASSTMVQSVGPDGSGVPQYLFSARRSVLHTLAQRYPLYRKMVALLDAR EPVMFKIDAQSRNWLASMSGPIAQRARADYPCGCDIDTALPIADYRGAQAVCPTVCAAQGGWNGQWTNQSPAAPAGQSAC GCNACPTSAAAKLPRALATRAAPGDRAKP >Mature_509_residues MELTPAPRAGMRAHRQTPRQAHRFARVIRQGTIMRRLLCCFTIVLGFLFAAPSHAGDAAAVGQLTVALYPWVPRVDQFKR AIETEWKKAQPGVALRFVSAHAWDGGYRNDPPASADVYVYDAIFLDYFRSQNWLEPLAADEIQHIDDFLPYAIQGVKAGD RYYSIPQLGCANVLFYRKDDAALAAATTLTQVRGALEQCTFTSEIPPDRRGLMVDMSGRTTNAALYLDAAHSRTGAYPLP LPWNANDLNGEALGSLRALMAMSSWPNATAELPGQYDRSVWFSDGEGRAVIGYSESMSAMSEAARRDLDFKFLPLSDTPQ PPLFYADVIGVNTTTHARGTRALAVQLANVIAASSTMVQSVGPDGSGVPQYLFSARRSVLHTLAQRYPLYRKMVALLDAR EPVMFKIDAQSRNWLASMSGPIAQRARADYPCGCDIDTALPIADYRGAQAVCPTVCAAQGGWNGQWTNQSPAAPAGQSAC GCNACPTSAAAKLPRALATRAAPGDRAKP
Specific function: Degrades thiamine by replacing its thiazole moiety with a wide range of nucleophiles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: =2.5.1.2 [H]
Molecular weight: Translated: 55251; Mature: 55251
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTPAPRAGMRAHRQTPRQAHRFARVIRQGTIMRRLLCCFTIVLGFLFAAPSHAGDAAA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VGQLTVALYPWVPRVDQFKRAIETEWKKAQPGVALRFVSAHAWDGGYRNDPPASADVYVY HHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEH DAIFLDYFRSQNWLEPLAADEIQHIDDFLPYAIQGVKAGDRYYSIPQLGCANVLFYRKDD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECCC AALAAATTLTQVRGALEQCTFTSEIPPDRRGLMVDMSGRTTNAALYLDAAHSRTGAYPLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC LPWNANDLNGEALGSLRALMAMSSWPNATAELPGQYDRSVWFSDGEGRAVIGYSESMSAM CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHH SEAARRDLDFKFLPLSDTPQPPLFYADVIGVNTTTHARGTRALAVQLANVIAASSTMVQS HHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VGPDGSGVPQYLFSARRSVLHTLAQRYPLYRKMVALLDAREPVMFKIDAQSRNWLASMSG CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCC PIAQRARADYPCGCDIDTALPIADYRGAQAVCPTVCAAQGGWNGQWTNQSPAAPAGQSAC HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GCNACPTSAAAKLPRALATRAAPGDRAKP CCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MELTPAPRAGMRAHRQTPRQAHRFARVIRQGTIMRRLLCCFTIVLGFLFAAPSHAGDAAA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VGQLTVALYPWVPRVDQFKRAIETEWKKAQPGVALRFVSAHAWDGGYRNDPPASADVYVY HHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEH DAIFLDYFRSQNWLEPLAADEIQHIDDFLPYAIQGVKAGDRYYSIPQLGCANVLFYRKDD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECCC AALAAATTLTQVRGALEQCTFTSEIPPDRRGLMVDMSGRTTNAALYLDAAHSRTGAYPLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC LPWNANDLNGEALGSLRALMAMSSWPNATAELPGQYDRSVWFSDGEGRAVIGYSESMSAM CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHH SEAARRDLDFKFLPLSDTPQPPLFYADVIGVNTTTHARGTRALAVQLANVIAASSTMVQS HHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VGPDGSGVPQYLFSARRSVLHTLAQRYPLYRKMVALLDAREPVMFKIDAQSRNWLASMSG CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCC PIAQRARADYPCGCDIDTALPIADYRGAQAVCPTVCAAQGGWNGQWTNQSPAAPAGQSAC HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GCNACPTSAAAKLPRALATRAAPGDRAKP CCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8631946; 9843405 [H]