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The map label for this gene is 126209476

Identifier: 126209476

GI number: 126209476

Start: 2249794

End: 2250234

Strand: Direct

Name: 126209476

Synonym: APL_2022

Alternate gene names: NA

Gene position: 2249794-2250234 (Clockwise)

Preceding gene: 126209475

Following gene: 126209477

Centisome position: 98.91

GC content: 35.37

Gene sequence:

>441_bases
ATGAGCTATACCAAACTTTTTTATCATATCGTTTTTCGCACGCTACAAAGCGTTCCTGCAATTAACGAAGAAAATGAGAA
AGAGTTGTATCAATATATTTGGGCATTTTGTCAGCAACAAAAATGCACGTTGCATCACATAAATGGAATGCCTGATCATT
TACATTTATTGGTGGAAATTCACCCAAGTATGGCGGTAGCTGATTTTGTAAAACAGCTTAAAAATGCGAGCCATAAATGG
CTTGAACACCATAGTGATCTTTTTCCTGATTTTTACGCTTGGTCGAAAGGTTATTGTGCGTTGAGTTATAGCGAACACGA
AATTGGGAAAATTATCAATTACATCAAAGGGCAGAAAGAACATCATAAAACGTGGAGTTTTGTTGATGAGATGAAAGCGT
TGCTTGGAAATGTAAATGAATATCTCGAACAAGATTTATAA

Upstream 100 bases:

>100_bases
CCCAGCCACGCTGTGGCTGTTAATTAGATAATATAAGAGCCACAGCGTAGCTCAGATTAAGTAGCCCCATACAGCTCGTA
TGGGGAATAAAAGGAGAAAT

Downstream 100 bases:

>100_bases
CCTAGCACGAGCCGTGCTAGGTTCCATAAACCCAGCCACGCTGTGGCTGATAATTAGATAATATAGAGCCGCAGGGCGGC
TCGGATTAAGTAGCCCCATA

Product: transposase IS200

Products: NA

Alternate protein names: Transposase IS

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSYTKLFYHIVFRTLQSVPAINEENEKELYQYIWAFCQQQKCTLHHINGMPDHLHLLVEIHPSMAVADFVKQLKNASHKW
LEHHSDLFPDFYAWSKGYCALSYSEHEIGKIINYIKGQKEHHKTWSFVDEMKALLGNVNEYLEQDL

Sequences:

>Translated_146_residues
MSYTKLFYHIVFRTLQSVPAINEENEKELYQYIWAFCQQQKCTLHHINGMPDHLHLLVEIHPSMAVADFVKQLKNASHKW
LEHHSDLFPDFYAWSKGYCALSYSEHEIGKIINYIKGQKEHHKTWSFVDEMKALLGNVNEYLEQDL
>Mature_145_residues
SYTKLFYHIVFRTLQSVPAINEENEKELYQYIWAFCQQQKCTLHHINGMPDHLHLLVEIHPSMAVADFVKQLKNASHKWL
EHHSDLFPDFYAWSKGYCALSYSEHEIGKIINYIKGQKEHHKTWSFVDEMKALLGNVNEYLEQDL

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17340; Mature: 17209

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTKLFYHIVFRTLQSVPAINEENEKELYQYIWAFCQQQKCTLHHINGMPDHLHLLVEI
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHC
HPSMAVADFVKQLKNASHKWLEHHSDLFPDFYAWSKGYCALSYSEHEIGKIINYIKGQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHHHHHCCCHH
HHKTWSFVDEMKALLGNVNEYLEQDL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYTKLFYHIVFRTLQSVPAINEENEKELYQYIWAFCQQQKCTLHHINGMPDHLHLLVEI
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHC
HPSMAVADFVKQLKNASHKWLEHHSDLFPDFYAWSKGYCALSYSEHEIGKIINYIKGQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHHHHHCCCHH
HHKTWSFVDEMKALLGNVNEYLEQDL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA