| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is fct [H]
Identifier: 126209470
GI number: 126209470
Start: 2242636
End: 2244489
Strand: Direct
Name: fct [H]
Synonym: APL_2016
Alternate gene names: 126209470
Gene position: 2242636-2244489 (Clockwise)
Preceding gene: 126209469
Following gene: 126209471
Centisome position: 98.6
GC content: 36.25
Gene sequence:
>1854_bases ATGACACCTAAATCGGTATCTGTATTAACAGAAGAACAGATCAAAGAGAAAGGTTATAAACAAGCTGATGAAATTGGTCG TTATGAAGCAGGTATCTTAAGTCAGCCGTATGGAGGAGATATTGATACCCATGATTGGATTCGTATTCGTGGTTTTAGTC CAACTCTTCGTATTGACGGTACGGCAATGTATAGCTTTGGTTTCTATCATTGGCAACCGAATATGTATGGCTTAGAAAGT ATTGAGGTTGTGAAAGGCGCAGATTCTCTTACTTATGGTTCAGCTCAAAGTGGCGGATTAATTAATTTAGTTAGCAAGCG TCCGACAAAAGAGCCGAAAGGTGAGTTGAAGTTTACGTTGGGAAATAGAAACGAGAGAGGTTTTTCAGCGGATTATAGTA ATGTTATTAGTGAAAATGTTCGTTTCCGTCTAGTTGGTGATTACAACCGAAGAGACGGTGAGCCGAAAGGCAGTTATATG GATGCTTATTACTTTGCTCCAAGTCTTTCGTGGGATATTAGTAAAAATACCAGTTTGACTTTATTAGCGAGTATTCAGCA TGATGATGGTCGTCCAAGTTCAGGTTTTTTCCCTGCCGGTTATGAAAGATTATCTTCTTTAGGATTATCTAATCGTACTA ATTTTGCAGAAAATGTACCGGAATATTTACGCCGTAATCAATATTCTGTCGGTTATGAATTTACTCATAAATTTAGTGAT GATTTAGTTTATCAGTCAAATTATCGCTATGCTTATAGCAATAAAGACCAATTTAGTGCTTCTATCGGTTCGGATGGTTC ATCTTTAAGTACAATGACGGCAAGAGGAAAAACCTTTACGCACTCATTAGATAATCGTTTAAGCAAAACATGGGCAATAG ATCGCATTGAAAATATCTTAACGGTTGGTTTTGATTATACGACGGGTAAAAACTATGCAGCAAACGGTTATGGCAGTGAA ATATTGAGTAACCTATACGGTAATTATCCAACAGCAGCACAACCGTTTGGTGCGGTATCTCCTTATGTAAATAAAGAAAG ACAATTAGGCGTATATTTGCAAAATCAATTCCGTTTTGATAATAGATTGCTAGTAAATTTAGGCGCTCGCCGTGATTTTG CAAAGGGTGACTACGGTGATGAGGGATATGATATTAATCATAATAGCTACTCAGCCGGTGTAATGTATATTACGGATTCG GGCTTATCTCCATTTTATAATTATTCCGAGTCTTTCCGTCCAATCTCAGGATCTAATATTAACGGACAAATTGTTCGTTA TAAGCCTTATGAAGGTACACAACATGAAGTAGGTTTTAAATATTTACCTAGTTTTGCGGACGGAACTCTGTCTATTGCCT ATTTTGATTTAAAAGAGAAAAATGGTTTAGTTCAGGGAGTAGTGAATGGACAGGTTACTCAGCTACAAACAGAGAAAGCT AAAAGTAAAGGTGTAGAATTACAGGCGGATATGAAGCTGAATGATAATATCTCAACGTTATTAGCTTATACTTATACGAA TGCAAAGGTGAATAATGCACGTAAGGTGATTATTCCTCGTCATACATATTCTGCTTTTGTAAATTATTCCTTCACAAATG AAGCATTAGCGGGTCTAAAAATAGGAACAGGAATTAGATACATAGGTACGAGTACGAATGGTGTAACTGAGGTAAAAATT CCCGCTTATACTTTAGTTGATTTAATGGCTAAATATGACTTAAATAAGAACTGGACTGCACAGGTTAATGTTTCTAATTT GAGTAACAAAAAATATATAAGTGCATGTGATACTTATTGGTGTTATATGGGAGAAGGTCGCAAAGTTACAGCGAACTTAA CCTACAAATTCTAA
Upstream 100 bases:
>100_bases AGTTGCCTTAGCTATCTCACCGGCAATCGCGCAAGAAACCGCGGTATTGGATGAGGTGTCGGTGGTCGGCTCTGTTTCTA AAGCAGGTAAGGTGGAATAT
Downstream 100 bases:
>100_bases TTTACAAAACCTATTAAAAGAGCTGATAATTTCAGCTCTTTTTTATCATAATCATAAGGAAACAATATGCAATTTAAAGA CTATTTAGCTACCTTCTCAG
Product: ferrioxamine B receptor precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MTPKSVSVLTEEQIKEKGYKQADEIGRYEAGILSQPYGGDIDTHDWIRIRGFSPTLRIDGTAMYSFGFYHWQPNMYGLES IEVVKGADSLTYGSAQSGGLINLVSKRPTKEPKGELKFTLGNRNERGFSADYSNVISENVRFRLVGDYNRRDGEPKGSYM DAYYFAPSLSWDISKNTSLTLLASIQHDDGRPSSGFFPAGYERLSSLGLSNRTNFAENVPEYLRRNQYSVGYEFTHKFSD DLVYQSNYRYAYSNKDQFSASIGSDGSSLSTMTARGKTFTHSLDNRLSKTWAIDRIENILTVGFDYTTGKNYAANGYGSE ILSNLYGNYPTAAQPFGAVSPYVNKERQLGVYLQNQFRFDNRLLVNLGARRDFAKGDYGDEGYDINHNSYSAGVMYITDS GLSPFYNYSESFRPISGSNINGQIVRYKPYEGTQHEVGFKYLPSFADGTLSIAYFDLKEKNGLVQGVVNGQVTQLQTEKA KSKGVELQADMKLNDNISTLLAYTYTNAKVNNARKVIIPRHTYSAFVNYSFTNEALAGLKIGTGIRYIGTSTNGVTEVKI PAYTLVDLMAKYDLNKNWTAQVNVSNLSNKKYISACDTYWCYMGEGRKVTANLTYKF
Sequences:
>Translated_617_residues MTPKSVSVLTEEQIKEKGYKQADEIGRYEAGILSQPYGGDIDTHDWIRIRGFSPTLRIDGTAMYSFGFYHWQPNMYGLES IEVVKGADSLTYGSAQSGGLINLVSKRPTKEPKGELKFTLGNRNERGFSADYSNVISENVRFRLVGDYNRRDGEPKGSYM DAYYFAPSLSWDISKNTSLTLLASIQHDDGRPSSGFFPAGYERLSSLGLSNRTNFAENVPEYLRRNQYSVGYEFTHKFSD DLVYQSNYRYAYSNKDQFSASIGSDGSSLSTMTARGKTFTHSLDNRLSKTWAIDRIENILTVGFDYTTGKNYAANGYGSE ILSNLYGNYPTAAQPFGAVSPYVNKERQLGVYLQNQFRFDNRLLVNLGARRDFAKGDYGDEGYDINHNSYSAGVMYITDS GLSPFYNYSESFRPISGSNINGQIVRYKPYEGTQHEVGFKYLPSFADGTLSIAYFDLKEKNGLVQGVVNGQVTQLQTEKA KSKGVELQADMKLNDNISTLLAYTYTNAKVNNARKVIIPRHTYSAFVNYSFTNEALAGLKIGTGIRYIGTSTNGVTEVKI PAYTLVDLMAKYDLNKNWTAQVNVSNLSNKKYISACDTYWCYMGEGRKVTANLTYKF >Mature_616_residues TPKSVSVLTEEQIKEKGYKQADEIGRYEAGILSQPYGGDIDTHDWIRIRGFSPTLRIDGTAMYSFGFYHWQPNMYGLESI EVVKGADSLTYGSAQSGGLINLVSKRPTKEPKGELKFTLGNRNERGFSADYSNVISENVRFRLVGDYNRRDGEPKGSYMD AYYFAPSLSWDISKNTSLTLLASIQHDDGRPSSGFFPAGYERLSSLGLSNRTNFAENVPEYLRRNQYSVGYEFTHKFSDD LVYQSNYRYAYSNKDQFSASIGSDGSSLSTMTARGKTFTHSLDNRLSKTWAIDRIENILTVGFDYTTGKNYAANGYGSEI LSNLYGNYPTAAQPFGAVSPYVNKERQLGVYLQNQFRFDNRLLVNLGARRDFAKGDYGDEGYDINHNSYSAGVMYITDSG LSPFYNYSESFRPISGSNINGQIVRYKPYEGTQHEVGFKYLPSFADGTLSIAYFDLKEKNGLVQGVVNGQVTQLQTEKAK SKGVELQADMKLNDNISTLLAYTYTNAKVNNARKVIIPRHTYSAFVNYSFTNEALAGLKIGTGIRYIGTSTNGVTEVKIP AYTLVDLMAKYDLNKNWTAQVNVSNLSNKKYISACDTYWCYMGEGRKVTANLTYKF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=677, Percent_Identity=29.2466765140325, Blast_Score=242, Evalue=5e-65, Organism=Escherichia coli, GI1787344, Length=672, Percent_Identity=23.8095238095238, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1787024, Length=711, Percent_Identity=23.3473980309423, Blast_Score=93, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 69194; Mature: 69063
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKSVSVLTEEQIKEKGYKQADEIGRYEAGILSQPYGGDIDTHDWIRIRGFSPTLRIDG CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECC TAMYSFGFYHWQPNMYGLESIEVVKGADSLTYGSAQSGGLINLVSKRPTKEPKGELKFTL EEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE GNRNERGFSADYSNVISENVRFRLVGDYNRRDGEPKGSYMDAYYFAPSLSWDISKNTSLT CCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCEE LLASIQHDDGRPSSGFFPAGYERLSSLGLSNRTNFAENVPEYLRRNQYSVGYEFTHKFSD EEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC DLVYQSNYRYAYSNKDQFSASIGSDGSSLSTMTARGKTFTHSLDNRLSKTWAIDRIENIL CEEEECCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCEE TVGFDYTTGKNYAANGYGSEILSNLYGNYPTAAQPFGAVSPYVNKERQLGVYLQNQFRFD EEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC NRLLVNLGARRDFAKGDYGDEGYDINHNSYSAGVMYITDSGLSPFYNYSESFRPISGSNI CEEEEEECCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC NGQIVRYKPYEGTQHEVGFKYLPSFADGTLSIAYFDLKEKNGLVQGVVNGQVTQLQTEKA CCEEEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEHHHH KSKGVELQADMKLNDNISTLLAYTYTNAKVNNARKVIIPRHTYSAFVNYSFTNEALAGLK HHCCCEEEECCEECCCCEEEEEEEEECCEECCCEEEEEECCCEEEEEEEEECCHHHCCEE IGTGIRYIGTSTNGVTEVKIPAYTLVDLMAKYDLNKNWTAQVNVSNLSNKKYISACDTYW ECCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCEEE CYMGEGRKVTANLTYKF EEECCCCEEEEEEEEEC >Mature Secondary Structure TPKSVSVLTEEQIKEKGYKQADEIGRYEAGILSQPYGGDIDTHDWIRIRGFSPTLRIDG CCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECC TAMYSFGFYHWQPNMYGLESIEVVKGADSLTYGSAQSGGLINLVSKRPTKEPKGELKFTL EEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE GNRNERGFSADYSNVISENVRFRLVGDYNRRDGEPKGSYMDAYYFAPSLSWDISKNTSLT CCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCEE LLASIQHDDGRPSSGFFPAGYERLSSLGLSNRTNFAENVPEYLRRNQYSVGYEFTHKFSD EEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC DLVYQSNYRYAYSNKDQFSASIGSDGSSLSTMTARGKTFTHSLDNRLSKTWAIDRIENIL CEEEECCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCEE TVGFDYTTGKNYAANGYGSEILSNLYGNYPTAAQPFGAVSPYVNKERQLGVYLQNQFRFD EEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC NRLLVNLGARRDFAKGDYGDEGYDINHNSYSAGVMYITDSGLSPFYNYSESFRPISGSNI CEEEEEECCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC NGQIVRYKPYEGTQHEVGFKYLPSFADGTLSIAYFDLKEKNGLVQGVVNGQVTQLQTEKA CCEEEEECCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEHHHH KSKGVELQADMKLNDNISTLLAYTYTNAKVNNARKVIIPRHTYSAFVNYSFTNEALAGLK HHCCCEEEECCEECCCCEEEEEEEEECCEECCCEEEEEECCCEEEEEEEEECCHHHCCEE IGTGIRYIGTSTNGVTEVKIPAYTLVDLMAKYDLNKNWTAQVNVSNLSNKKYISACDTYW ECCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCEEE CYMGEGRKVTANLTYKF EEECCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]