| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209471
Identifier: 126209471
GI number: 126209471
Start: 2244556
End: 2244873
Strand: Direct
Name: 126209471
Synonym: APL_2017
Alternate gene names: NA
Gene position: 2244556-2244873 (Clockwise)
Preceding gene: 126209470
Following gene: 126209473
Centisome position: 98.68
GC content: 42.14
Gene sequence:
>318_bases ATGCAATTTAAAGACTATTTAGCTACCTTCTCAGCGGTTGATCATCTTGCCGGTTTAAATGTGCGTAACGCACAGGGGGA AGTGATTCATCATATTCCGGCTGTGGAAGGTAAATTGGGTTCACTTAAACTGTACAATGCATTAGCGGAAAAATTTGACG GGAAATTAACCGCTTCAGCGGCACAAAAAGGTATTGAATGGTTTGCCGAACACGTGGAAGACGCAAAACAAAATGCCGGT AAACACCCGAATATCGACTTATTATTCAAAGTCATTAGCGAAGATTTAGCATTAACGCTCGAGCCTGTCGCAAAGTGA
Upstream 100 bases:
>100_bases CAAAGTTACAGCGAACTTAACCTACAAATTCTAATTTACAAAACCTATTAAAAGAGCTGATAATTTCAGCTCTTTTTTAT CATAATCATAAGGAAACAAT
Downstream 100 bases:
>100_bases TCATCGTGAAGTAATTCATAAACGACAAGCGGTCGGAATTTGCAGAAAATTTGCAGAATCCGACCGCTTGCTTTTAGGGA AAGCCGAGAATTATTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MQFKDYLATFSAVDHLAGLNVRNAQGEVIHHIPAVEGKLGSLKLYNALAEKFDGKLTASAAQKGIEWFAEHVEDAKQNAG KHPNIDLLFKVISEDLALTLEPVAK
Sequences:
>Translated_105_residues MQFKDYLATFSAVDHLAGLNVRNAQGEVIHHIPAVEGKLGSLKLYNALAEKFDGKLTASAAQKGIEWFAEHVEDAKQNAG KHPNIDLLFKVISEDLALTLEPVAK >Mature_105_residues MQFKDYLATFSAVDHLAGLNVRNAQGEVIHHIPAVEGKLGSLKLYNALAEKFDGKLTASAAQKGIEWFAEHVEDAKQNAG KHPNIDLLFKVISEDLALTLEPVAK
Specific function: Unknown
COG id: COG4390
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11467; Mature: 11467
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFKDYLATFSAVDHLAGLNVRNAQGEVIHHIPAVEGKLGSLKLYNALAEKFDGKLTASA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHH AQKGIEWFAEHVEDAKQNAGKHPNIDLLFKVISEDLALTLEPVAK HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQFKDYLATFSAVDHLAGLNVRNAQGEVIHHIPAVEGKLGSLKLYNALAEKFDGKLTASA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHH AQKGIEWFAEHVEDAKQNAGKHPNIDLLFKVISEDLALTLEPVAK HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA