| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209394
Identifier: 126209394
GI number: 126209394
Start: 2170294
End: 2170437
Strand: Reverse
Name: 126209394
Synonym: APL_1936
Alternate gene names: NA
Gene position: 2170437-2170294 (Counterclockwise)
Preceding gene: 126209395
Following gene: 126209393
Centisome position: 95.43
GC content: 38.19
Gene sequence:
>144_bases ATGAGTAATGAAGTCAGTACGAAGAAATTGATCGTTGGAACAATTTCATTGCTATGTGCCGTTATTTTCTTTGGCGGTTT TGCCAAAGATTTATGGGGTGGAATCTTTGATTACAGTAAACTGACCGGACAATTTCCCGAATAG
Upstream 100 bases:
>100_bases TTCCTCAATAACATTTCGTTTTTGTGAAACCAATCACAGTAATCTTTTATTATCTATACTATATTCTTTCCGCCTATCAT AACTAGATTAAGGAGAGAGT
Downstream 100 bases:
>100_bases TTAAAAACATCCGGAGGAACAAGTGCCAAAGGCGGTTTTATTTTCGCTTTAACCTTAGTGCCTAGCGTAATGTTAGCACT CGGTTTTGTTGCGGTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MSNEVSTKKLIVGTISLLCAVIFFGGFAKDLWGGIFDYSKLTGQFPE
Sequences:
>Translated_47_residues MSNEVSTKKLIVGTISLLCAVIFFGGFAKDLWGGIFDYSKLTGQFPE >Mature_46_residues SNEVSTKKLIVGTISLLCAVIFFGGFAKDLWGGIFDYSKLTGQFPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5130; Mature: 4999
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEVSTKKLIVGTISLLCAVIFFGGFAKDLWGGIFDYSKLTGQFPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNEVSTKKLIVGTISLLCAVIFFGGFAKDLWGGIFDYSKLTGQFPE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA