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The map label for this gene is yjiH [H]

Identifier: 126209393

GI number: 126209393

Start: 2169799

End: 2170224

Strand: Reverse

Name: yjiH [H]

Synonym: APL_1935

Alternate gene names: 126209393

Gene position: 2170224-2169799 (Counterclockwise)

Preceding gene: 126209394

Following gene: 126209392

Centisome position: 95.42

GC content: 43.66

Gene sequence:

>426_bases
ATGTTAGCACTCGGTTTTGTTGCGGTTTTTGAGCATTTCGGGGCGTTATTGGCGGCTTCTAAATGGCTTAGCCCGATTTT
AAAACCGCTGATGGGTATTCCGGGCGTTTGTTCCATTTCTTTAATTGCCAGTACGCAAAGTACCGATGCCGGTAGTTCTA
CTACCCGTTTCTTACGCAATGAAAACCAAATCAGCCATAAAGAACTGCTTATTTTTGCCGCCTTCCAATTTAGTGCCGGC
GCATTTTTAACCAATTTCCTTTCCTCTTTCGCACCGCTGTTATTAATTACCGATAAAGCCGGCAGCGTCGCACCGCTTTC
CATTGCAATGTGCTTAGGCATTATTTTCCTGTTTAAAATATTCGGGGCGAATCTAATGCGTCTTTATGTGAAAAAATTTG
TGAAAGAAGGCGAGGTGGGTGTATGA

Upstream 100 bases:

>100_bases
CAGTAAACTGACCGGACAATTTCCCGAATAGTTAAAAACATCCGGAGGAACAAGTGCCAAAGGCGGTTTTATTTTCGCTT
TAACCTTAGTGCCTAGCGTA

Downstream 100 bases:

>100_bases
GTAATACCAACGATAACAAATTAGTGACCGACGTATTTATCGAAGGCGCGCGAAAAGGCTGGAATATTGCGATTACCAGT
ACGATTCCGAACGTATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLALGFVAVFEHFGALLAASKWLSPILKPLMGIPGVCSISLIASTQSTDAGSSTTRFLRNENQISHKELLIFAAFQFSAG
AFLTNFLSSFAPLLLITDKAGSVAPLSIAMCLGIIFLFKIFGANLMRLYVKKFVKEGEVGV

Sequences:

>Translated_141_residues
MLALGFVAVFEHFGALLAASKWLSPILKPLMGIPGVCSISLIASTQSTDAGSSTTRFLRNENQISHKELLIFAAFQFSAG
AFLTNFLSSFAPLLLITDKAGSVAPLSIAMCLGIIFLFKIFGANLMRLYVKKFVKEGEVGV
>Mature_141_residues
MLALGFVAVFEHFGALLAASKWLSPILKPLMGIPGVCSISLIASTQSTDAGSSTTRFLRNENQISHKELLIFAAFQFSAG
AFLTNFLSSFAPLLLITDKAGSVAPLSIAMCLGIIFLFKIFGANLMRLYVKKFVKEGEVGV

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082423, Length=131, Percent_Identity=37.4045801526718, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 15134; Mature: 15134

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALGFVAVFEHFGALLAASKWLSPILKPLMGIPGVCSISLIASTQSTDAGSSTTRFLRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCHHHHHHHC
ENQISHKELLIFAAFQFSAGAFLTNFLSSFAPLLLITDKAGSVAPLSIAMCLGIIFLFKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
FGANLMRLYVKKFVKEGEVGV
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLALGFVAVFEHFGALLAASKWLSPILKPLMGIPGVCSISLIASTQSTDAGSSTTRFLRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCHHHHHHHC
ENQISHKELLIFAAFQFSAGAFLTNFLSSFAPLLLITDKAGSVAPLSIAMCLGIIFLFKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
FGANLMRLYVKKFVKEGEVGV
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]