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The map label for this gene is lonH [C]

Identifier: 126209350

GI number: 126209350

Start: 2121879

End: 2123516

Strand: Reverse

Name: lonH [C]

Synonym: APL_1890

Alternate gene names: 126209350

Gene position: 2123516-2121879 (Counterclockwise)

Preceding gene: 126209352

Following gene: 126209349

Centisome position: 93.36

GC content: 38.16

Gene sequence:

>1638_bases
GTGAATTTAACCCCATTAGCGTGGCAATCTTTAACGATTCGGCATCAATTTTCCGAAGAATTTGATGCGGTACGTTTCTT
TGATTTTCAACCCAATGCAAAGCAAGCGATTGATCTGTTTAAACGAGGGCAGTTCGGTTCGTTGCTTGTGTTAAAAACAG
AAACTTTCCCCGAATTTATTAATGAAATCGAGCAGTATTTAACCCAAGACGTTCACACTAAAGTGATTACCAAAACCGAA
TTTAATAAAAATAATTTATTCGGTTACAGTATTTATTTGGAAAAAGAAAATAAAGTCGAAACGATTCAAGGGGCGATTCA
AGATGCCGATCAGCATATTTTAATGCTGAATATCAACGCATTATTATTGGATATTACCCAATGGGATAAATTAAAGCAGG
CATTATTATTCGGTTATTATGATCAACATTCGCTGAATCACATTCCTTATTTACTACCGAAGATTCAAACGCAATTTAAA
TTAGTATTAATCGGTAGCCGAGAAGATATTTCTATGTTAGCGGAATATGACGACGGTTTATATCAGTTCGGGCAATATGC
CGAAATTGAATCTTATTTAAGTTTAGACGAAGAAAGTATCGAATTGTGGGGCGATTATGTGCAAAGTACGGCACAAAGTT
TAATCGGCAGAACTTTTTCCGATACGGCGTTAAGTCAGTTTTTGCAAGCCTATGTGCGTGAAAGCGAGAGTCAGGAATTG
GTTTCCATTTCGCCGACCTTATTAAAAAAACATTTATTAGGACTGGCAAATTTTTATCCGAATACGACCGCTTTTAATCA
AATTCAGCCGTATTTCAATTATTTGGAACAGCAATCTTCCGTGTTAAATAAATATACTACGCAAGATATTTTGACCAATC
AGTTATATATTGAAACCGATGATGAAGAAATCGGACAAATAAACGGTTTATCGGTGATTGAATTTGAAGGTGTGCCGCAT
TCTTTCGGCGAGCCGTTGCGGATTAGCTGCAATGTGCAATACGGTGACGGCGAAATTACCGATATTGAGCGTAAAGTGGA
ATTAGGCGGTAACATTCATTCCAAAGGAATTATTATTGCACAATCTTGCTTGGCGAATTTATTGGAGTTTCCTACCCAAT
TACCGTTTTCCGCCTCATTGGCGTTCGAGCAATCTTACGGAGAGGTGGACGGCGACAGCTCTTCGTTGGCGATTTTCTGT
GTATTAATCAGTGCGTTGGCAAAATTACCGCTGCCGCAGTCGATTGCCGTTACCGGTTCTATCGATCAATTCGGTAACGT
GTTGAGTGTCGGCGGTGTGAATCAGAAAATTGAAGGCTTCTTCAATATTTGCGAGGCGAGAGAATTAAACGGTAAGCAAG
GGGTAATTATTCCGGCGACTTGTCTTTCGCATTTAAGTTTAAAAGAGGAAGTAATCGAAGCGGTTAAAGAAAAACGGTTC
AATATTTGGGCGGTTAATAATGTTTTTGAAGCGATTCAAATTTTATTAAAGCAACACTTTTATGATGAAGATAATCCTGA
AAATAGCGATAAGCAATCGATCTTTAGCCTTATTCATCAATTAATCGAACAAGAGCAGACCCGTGAGGAAAGCGGTTCGT
TTTTCAGTAAAATTTTCCAAATTTTGCGTCGTCACTGA

Upstream 100 bases:

>100_bases
ATTTTTGATATCGCATTTTTATTTGATTCCCCTAGATTAACGCTTATCAGTATAGCGGAATTCTGTATAATAAACCAAAT
TTCTATTATGAGGCATTTTC

Downstream 100 bases:

>100_bases
TCCGACAAGTTCAGCGAACAGTTGTTCGCTAATTTAAAAGCCTGTACTATCGCTTCAAATTGGAAGCCCTGATAGTACGG
GCTTTTTTGTTTGTCTATAG

Product: putative protease La-like protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNLTPLAWQSLTIRHQFSEEFDAVRFFDFQPNAKQAIDLFKRGQFGSLLVLKTETFPEFINEIEQYLTQDVHTKVITKTE
FNKNNLFGYSIYLEKENKVETIQGAIQDADQHILMLNINALLLDITQWDKLKQALLFGYYDQHSLNHIPYLLPKIQTQFK
LVLIGSREDISMLAEYDDGLYQFGQYAEIESYLSLDEESIELWGDYVQSTAQSLIGRTFSDTALSQFLQAYVRESESQEL
VSISPTLLKKHLLGLANFYPNTTAFNQIQPYFNYLEQQSSVLNKYTTQDILTNQLYIETDDEEIGQINGLSVIEFEGVPH
SFGEPLRISCNVQYGDGEITDIERKVELGGNIHSKGIIIAQSCLANLLEFPTQLPFSASLAFEQSYGEVDGDSSSLAIFC
VLISALAKLPLPQSIAVTGSIDQFGNVLSVGGVNQKIEGFFNICEARELNGKQGVIIPATCLSHLSLKEEVIEAVKEKRF
NIWAVNNVFEAIQILLKQHFYDEDNPENSDKQSIFSLIHQLIEQEQTREESGSFFSKIFQILRRH

Sequences:

>Translated_545_residues
MNLTPLAWQSLTIRHQFSEEFDAVRFFDFQPNAKQAIDLFKRGQFGSLLVLKTETFPEFINEIEQYLTQDVHTKVITKTE
FNKNNLFGYSIYLEKENKVETIQGAIQDADQHILMLNINALLLDITQWDKLKQALLFGYYDQHSLNHIPYLLPKIQTQFK
LVLIGSREDISMLAEYDDGLYQFGQYAEIESYLSLDEESIELWGDYVQSTAQSLIGRTFSDTALSQFLQAYVRESESQEL
VSISPTLLKKHLLGLANFYPNTTAFNQIQPYFNYLEQQSSVLNKYTTQDILTNQLYIETDDEEIGQINGLSVIEFEGVPH
SFGEPLRISCNVQYGDGEITDIERKVELGGNIHSKGIIIAQSCLANLLEFPTQLPFSASLAFEQSYGEVDGDSSSLAIFC
VLISALAKLPLPQSIAVTGSIDQFGNVLSVGGVNQKIEGFFNICEARELNGKQGVIIPATCLSHLSLKEEVIEAVKEKRF
NIWAVNNVFEAIQILLKQHFYDEDNPENSDKQSIFSLIHQLIEQEQTREESGSFFSKIFQILRRH
>Mature_545_residues
MNLTPLAWQSLTIRHQFSEEFDAVRFFDFQPNAKQAIDLFKRGQFGSLLVLKTETFPEFINEIEQYLTQDVHTKVITKTE
FNKNNLFGYSIYLEKENKVETIQGAIQDADQHILMLNINALLLDITQWDKLKQALLFGYYDQHSLNHIPYLLPKIQTQFK
LVLIGSREDISMLAEYDDGLYQFGQYAEIESYLSLDEESIELWGDYVQSTAQSLIGRTFSDTALSQFLQAYVRESESQEL
VSISPTLLKKHLLGLANFYPNTTAFNQIQPYFNYLEQQSSVLNKYTTQDILTNQLYIETDDEEIGQINGLSVIEFEGVPH
SFGEPLRISCNVQYGDGEITDIERKVELGGNIHSKGIIIAQSCLANLLEFPTQLPFSASLAFEQSYGEVDGDSSSLAIFC
VLISALAKLPLPQSIAVTGSIDQFGNVLSVGGVNQKIEGFFNICEARELNGKQGVIIPATCLSHLSLKEEVIEAVKEKRF
NIWAVNNVFEAIQILLKQHFYDEDNPENSDKQSIFSLIHQLIEQEQTREESGSFFSKIFQILRRH

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=430, Percent_Identity=42.093023255814, Blast_Score=317, Evalue=9e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.-

Molecular weight: Translated: 61998; Mature: 61998

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTPLAWQSLTIRHQFSEEFDAVRFFDFQPNAKQAIDLFKRGQFGSLLVLKTETFPEFI
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHH
NEIEQYLTQDVHTKVITKTEFNKNNLFGYSIYLEKENKVETIQGAIQDADQHILMLNINA
HHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCE
LLLDITQWDKLKQALLFGYYDQHSLNHIPYLLPKIQTQFKLVLIGSREDISMLAEYDDGL
EEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHCCHH
YQFGQYAEIESYLSLDEESIELWGDYVQSTAQSLIGRTFSDTALSQFLQAYVRESESQEL
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCE
VSISPTLLKKHLLGLANFYPNTTAFNQIQPYFNYLEQQSSVLNKYTTQDILTNQLYIETD
EECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
DEEIGQINGLSVIEFEGVPHSFGEPLRISCNVQYGDGEITDIERKVELGGNIHSKGIIIA
CHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHCCCCCCCCCEEEH
QSCLANLLEFPTQLPFSASLAFEQSYGEVDGDSSSLAIFCVLISALAKLPLPQSIAVTGS
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC
IDQFGNVLSVGGVNQKIEGFFNICEARELNGKQGVIIPATCLSHLSLKEEVIEAVKEKRF
HHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
NIWAVNNVFEAIQILLKQHFYDEDNPENSDKQSIFSLIHQLIEQEQTREESGSFFSKIFQ
CEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILRRH
HHHCC
>Mature Secondary Structure
MNLTPLAWQSLTIRHQFSEEFDAVRFFDFQPNAKQAIDLFKRGQFGSLLVLKTETFPEFI
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHH
NEIEQYLTQDVHTKVITKTEFNKNNLFGYSIYLEKENKVETIQGAIQDADQHILMLNINA
HHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCE
LLLDITQWDKLKQALLFGYYDQHSLNHIPYLLPKIQTQFKLVLIGSREDISMLAEYDDGL
EEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHCCHH
YQFGQYAEIESYLSLDEESIELWGDYVQSTAQSLIGRTFSDTALSQFLQAYVRESESQEL
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCE
VSISPTLLKKHLLGLANFYPNTTAFNQIQPYFNYLEQQSSVLNKYTTQDILTNQLYIETD
EECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
DEEIGQINGLSVIEFEGVPHSFGEPLRISCNVQYGDGEITDIERKVELGGNIHSKGIIIA
CHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHCCCCCCCCCEEEH
QSCLANLLEFPTQLPFSASLAFEQSYGEVDGDSSSLAIFCVLISALAKLPLPQSIAVTGS
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC
IDQFGNVLSVGGVNQKIEGFFNICEARELNGKQGVIIPATCLSHLSLKEEVIEAVKEKRF
HHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
NIWAVNNVFEAIQILLKQHFYDEDNPENSDKQSIFSLIHQLIEQEQTREESGSFFSKIFQ
CEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILRRH
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]