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The map label for this gene is murI [H]

Identifier: 126209303

GI number: 126209303

Start: 2064220

End: 2065017

Strand: Direct

Name: murI [H]

Synonym: APL_1841

Alternate gene names: 126209303

Gene position: 2064220-2065017 (Clockwise)

Preceding gene: 126209302

Following gene: 126209307

Centisome position: 90.76

GC content: 41.1

Gene sequence:

>798_bases
ATGAAACCGACAATCCTTTTATATGATTCGGGAATGGGCGGGCTAACCATTTATGATGCGATACGCCAAACTTTACCGAA
TGCCCATTATCTCTATTGTTTCGATAATGCTTACTTTCCTTATTCCGAGCGTTCTGAAAACGTCCTAATCGAACAAGCAG
TCAAAATTGTGCAAAAAATTGCAGAAAAATACCCGCTTGATATGGTCGTTGTCGCCTGTAATACGGCAAGTACCGTTGTA
TTACCGGCGTTAAGAGAAAAATTTGCCTTCCCGATTGTCGGAACCGTACCGGCAATCAAACCGGCTGCGGCAATTTCGCA
AACGAAAACCATCGGATTACTGGCAACAAAAGGGACGGTGGAACGACCTTATGTGGCGGAACTTATCGAAAAGTATGCGA
AAGATTGTATTGTTGAAAAGATTGGGACTACTACACTAGTCGAATTGGTAGAAGAAAAGATCCGAACCGGAAATGTTGAT
CAAGATCGATTGAGTAAAGTAGTCGCCGAGTGGCAAACGCATCCTACATTAGATACGGTGATTTTAGGTTGTACTCATTT
CCCGCTTGTGAAACAAGAATTACAGCAATTATTGCCGAATGTGAAATACTTTATTGATCCGGGTAACGGCATTGCCAATA
GAGTAAGTGCTTTACTTAGCGAATCTGTACCGGAGGAGCCGGAACAAAACAAGGAAAATATCGCCTTTTGTACGAAAATA
GATGAAGAGTTCTTTAAAAGAGAAGTAATTATGCAGCAATGGGGTTTCAAGCGGTTAGAATTGCTGAATTTTTTATAA

Upstream 100 bases:

>100_bases
TGTTCTTGGCGGATTTTCCTTATTTATAAAAAATAGAGAGCTTGAATCGCCTAAAATAAGAGAGTAGCATTCCGACTAAT
CTTTTATTTATTTCTATAAT

Downstream 100 bases:

>100_bases
AAATAAATTCTTTATAAATCAATGTGTTATTGTTTTTTGCGTGCATAAAAGTGGTGAAAAACACAACATTTGATAAAAAA
ATGCAAAAAAGTACTTGCAA

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKIAEKYPLDMVVVACNTASTVV
LPALREKFAFPIVGTVPAIKPAAAISQTKTIGLLATKGTVERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVD
QDRLSKVVAEWQTHPTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAFCTKI
DEEFFKREVIMQQWGFKRLELLNFL

Sequences:

>Translated_265_residues
MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKIAEKYPLDMVVVACNTASTVV
LPALREKFAFPIVGTVPAIKPAAAISQTKTIGLLATKGTVERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVD
QDRLSKVVAEWQTHPTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAFCTKI
DEEFFKREVIMQQWGFKRLELLNFL
>Mature_265_residues
MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKIAEKYPLDMVVVACNTASTVV
LPALREKFAFPIVGTVPAIKPAAAISQTKTIGLLATKGTVERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVD
QDRLSKVVAEWQTHPTLDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAFCTKI
DEEFFKREVIMQQWGFKRLELLNFL

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=265, Percent_Identity=47.9245283018868, Blast_Score=253, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 29813; Mature: 29813

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI
CCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
AEKYPLDMVVVACNTASTVVLPALREKFAFPIVGTVPAIKPAAAISQTKTIGLLATKGTV
HHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCC
ERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTHPTLDTV
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH
ILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAFCTKI
HHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
DEEFFKREVIMQQWGFKRLELLNFL
HHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI
CCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
AEKYPLDMVVVACNTASTVVLPALREKFAFPIVGTVPAIKPAAAISQTKTIGLLATKGTV
HHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCC
ERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTHPTLDTV
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH
ILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAFCTKI
HHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHH
DEEFFKREVIMQQWGFKRLELLNFL
HHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA