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The map label for this gene is rpmE2

Identifier: 126209283

GI number: 126209283

Start: 2043355

End: 2043624

Strand: Direct

Name: rpmE2

Synonym: APL_1821

Alternate gene names: 126209283

Gene position: 2043355-2043624 (Clockwise)

Preceding gene: 126209275

Following gene: 126209284

Centisome position: 89.84

GC content: 42.59

Gene sequence:

>270_bases
ATGAAAAAAGGGATTCACCCTGAAAATTATCGTGAAGTATTATTTTATGACGGTTCGGTACAAATGGGCTGGATTATTCG
TTCTTGTGCGGCGACGACAAAAACGATGGTGTGGGAAGACGGTAAAGAATATCCGTTTTACCCGTTAGATACATCGTCAG
CGTCACACCCGGTTTATACGGGTAAACGTCGTGAAGTGAATACGGAAGGTCGCGCAAGTAAATTTAACGAACGCTTTAAA
GGTATGGCAGGTTTAGCCGCTAAGAAATAA

Upstream 100 bases:

>100_bases
TAAAAACCATAAAAAAATTATAGAAATAAAAAAGATTATCGGGTAGGATATAACCACTTTTTATTTATGGAAATAAATGA
AACCTCTGGAGGATTTTAAA

Downstream 100 bases:

>100_bases
GGATAGATAATCGATGAAAATTTTAAACTCATTAAAAACGGCGAAAACACGCCATCCGGATTGCCAAATCGTACGTCGTA
AAGGCAAACTTTATGTGATT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MKKGIHPENYREVLFYDGSVQMGWIIRSCAATTKTMVWEDGKEYPFYPLDTSSASHPVYTGKRREVNTEGRASKFNERFK
GMAGLAAKK

Sequences:

>Translated_89_residues
MKKGIHPENYREVLFYDGSVQMGWIIRSCAATTKTMVWEDGKEYPFYPLDTSSASHPVYTGKRREVNTEGRASKFNERFK
GMAGLAAKK
>Mature_89_residues
MKKGIHPENYREVLFYDGSVQMGWIIRSCAATTKTMVWEDGKEYPFYPLDTSSASHPVYTGKRREVNTEGRASKFNERFK
GMAGLAAKK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=46.8354430379747, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_ACTP2 (A3N3B7)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054508.1
- ProteinModelPortal:   A3N3B7
- SMR:   A3N3B7
- STRING:   A3N3B7
- GeneID:   4848556
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1821
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- PhylomeDB:   A3N3B7
- ProtClustDB:   PRK01678
- BioCyc:   APLE416269:APL_1821-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 10154; Mature: 10154

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGIHPENYREVLFYDGSVQMGWIIRSCAATTKTMVWEDGKEYPFYPLDTSSASHPVYT
CCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHCEEEECCCCCCCCEECCCCCCCCCEEC
GKRREVNTEGRASKFNERFKGMAGLAAKK
CCCCCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKGIHPENYREVLFYDGSVQMGWIIRSCAATTKTMVWEDGKEYPFYPLDTSSASHPVYT
CCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHCEEEECCCCCCCCEECCCCCCCCCEEC
GKRREVNTEGRASKFNERFKGMAGLAAKK
CCCCCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA