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The map label for this gene is rpmJ

Identifier: 126209284

GI number: 126209284

Start: 2043638

End: 2043763

Strand: Direct

Name: rpmJ

Synonym: APL_1822

Alternate gene names: 126209284

Gene position: 2043638-2043763 (Clockwise)

Preceding gene: 126209283

Following gene: 126209292

Centisome position: 89.85

GC content: 38.1

Gene sequence:

>126_bases
ATGAAAATTTTAAACTCATTAAAAACGGCGAAAACACGCCATCCGGATTGCCAAATCGTACGTCGTAAAGGCAAACTTTA
TGTGATTTGTAAAAGCAATCCTCGCTTTAAAGCACGCCAACGTTAA

Upstream 100 bases:

>100_bases
AAACGTCGTGAAGTGAATACGGAAGGTCGCGCAAGTAAATTTAACGAACGCTTTAAAGGTATGGCAGGTTTAGCCGCTAA
GAAATAAGGATAGATAATCG

Downstream 100 bases:

>100_bases
TTTGATTTGAGATTCACTTAAATAAAAACGCATATTCAACCATCATTGAATATGCGTTTTTTGATCCGCGTTTCGTAAAA
ATTTCACGTTTTTCGACCGC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKILNSLKTAKTRHPDCQIVRRKGKLYVICKSNPRFKARQR

Sequences:

>Translated_41_residues
MKILNSLKTAKTRHPDCQIVRRKGKLYVICKSNPRFKARQR
>Mature_41_residues
MKILNSLKTAKTRHPDCQIVRRKGKLYVICKSNPRFKARQR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=40, Percent_Identity=85, Blast_Score=75, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL362_ACTP2 (A3N3B8)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054509.1
- ProteinModelPortal:   A3N3B8
- SMR:   A3N3B8
- STRING:   A3N3B8
- GeneID:   4848557
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1822
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- PhylomeDB:   A3N3B8
- ProtClustDB:   PRK00831
- BioCyc:   APLE416269:APL_1822-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4884; Mature: 4884

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILNSLKTAKTRHPDCQIVRRKGKLYVICKSNPRFKARQR
CCCHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKILNSLKTAKTRHPDCQIVRRKGKLYVICKSNPRFKARQR
CCCHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA