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The map label for this gene is fecD [C]

Identifier: 126209256

GI number: 126209256

Start: 2015459

End: 2016340

Strand: Direct

Name: fecD [C]

Synonym: APL_1792

Alternate gene names: 126209256

Gene position: 2015459-2016340 (Clockwise)

Preceding gene: 126209255

Following gene: 126209257

Centisome position: 88.61

GC content: 45.46

Gene sequence:

>882_bases
ATGAGTCATTTAACGGTTGAAAAGATCGTTCAAAACCAACGCAAGCTGGAACGCAAGCGTTGGTTTATCGTTCTTACTTT
CCTTGCAATCAGTTTAATCGGTTTGGTATTTGATATTGTCACCGGTCCTTCTATGTTACCACTGGACGAAGTAGTAAAAG
CGTTATTACGTTTTGAAGATGTGGAGACCACCACAAACGTTATCGTCTATGATTTACGCTTACCGATGGCATTAATGGCA
TTGGTGGTTGGGGCGGCATTAGGTGTTGGCGGTGCGGAGATTCAAACCTTGTTGAATAACCCGATGGCAAGCCCTTATAC
CTTAGGTTTAGCCGCAGCGGCCGGTTTAGGCGCTTCAACGGTCATTGCATTTGGCGGTTTCGGTTTACCTTCTGCGTTTG
CCGCACTGGAAATTTCGCAACAAATTCTGTTTTGGTTATTCGGCAGTTTAACTAAAGCGACTTGGGAAAACCTCTCAATT
GCGACGGTAGTAACGATTGTATGCGTTAGCTTACTTGCAAAAGATTTATGGAAATTGACCGCTTTGCGTTTAGGTGAGGC
ACGTGCGCTCAGTCTAGGGATCAACCTGCAACGCTTGCGTTTAAAAACGCTCGTCTTAGTCGCAATTATGACCGCAACTG
CAATTAGCTTTGTTGGCATTATCGGCTTTATCGGTTTGGTCGCACCGCACGTGGCGCGGATGTTATTGGGCGAAGATCAA
CGGTTTTTTCTGCCGGGCGCAATGTTAATCGGTGCGGCATTTTTATCGGTTGCTTCGGTATTATCCAAAGTGATTGTTCC
CGGTGCATTGTTCCCAGTGGGTATCATTACTTCATTTGTCGGCGTGCCTTTCTTCTTTTGGATTGTGCTTACTAAGAGAT
AA

Upstream 100 bases:

>100_bases
AGGATTTAGATCCGACCAAAACCTATCAAGAGTTTTATCGTAAAAACTTGCCTCTCGTGCCGCAAGGGACCTTCTATCTC
TACCCAGAGAGTAAATAGGC

Downstream 100 bases:

>100_bases
CAAGCGGTAGAATTTATGTTAAAACTTGCAAATGTTCATATTAAACGAGGTTCGCTTGTGATTGCCGACCAGTTGGATTT
GTCTTTAGAGAAAGGGAAAG

Product: Fe(III) dicitrate ABC transporter, permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSHLTVEKIVQNQRKLERKRWFIVLTFLAISLIGLVFDIVTGPSMLPLDEVVKALLRFEDVETTTNVIVYDLRLPMALMA
LVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLGASTVIAFGGFGLPSAFAALEISQQILFWLFGSLTKATWENLSI
ATVVTIVCVSLLAKDLWKLTALRLGEARALSLGINLQRLRLKTLVLVAIMTATAISFVGIIGFIGLVAPHVARMLLGEDQ
RFFLPGAMLIGAAFLSVASVLSKVIVPGALFPVGIITSFVGVPFFFWIVLTKR

Sequences:

>Translated_293_residues
MSHLTVEKIVQNQRKLERKRWFIVLTFLAISLIGLVFDIVTGPSMLPLDEVVKALLRFEDVETTTNVIVYDLRLPMALMA
LVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLGASTVIAFGGFGLPSAFAALEISQQILFWLFGSLTKATWENLSI
ATVVTIVCVSLLAKDLWKLTALRLGEARALSLGINLQRLRLKTLVLVAIMTATAISFVGIIGFIGLVAPHVARMLLGEDQ
RFFLPGAMLIGAAFLSVASVLSKVIVPGALFPVGIITSFVGVPFFFWIVLTKR
>Mature_292_residues
SHLTVEKIVQNQRKLERKRWFIVLTFLAISLIGLVFDIVTGPSMLPLDEVVKALLRFEDVETTTNVIVYDLRLPMALMAL
VVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLGASTVIAFGGFGLPSAFAALEISQQILFWLFGSLTKATWENLSIA
TVVTIVCVSLLAKDLWKLTALRLGEARALSLGINLQRLRLKTLVLVAIMTATAISFVGIIGFIGLVAPHVARMLLGEDQR
FFLPGAMLIGAAFLSVASVLSKVIVPGALFPVGIITSFVGVPFFFWIVLTKR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=319, Percent_Identity=30.4075235109718, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790741, Length=293, Percent_Identity=32.4232081911263, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1788004, Length=279, Percent_Identity=27.5985663082437, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786805, Length=305, Percent_Identity=30.4918032786885, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786804, Length=314, Percent_Identity=26.4331210191083, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786347, Length=266, Percent_Identity=27.4436090225564, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 31423; Mature: 31292

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHLTVEKIVQNQRKLERKRWFIVLTFLAISLIGLVFDIVTGPSMLPLDEVVKALLRFED
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VETTTNVIVYDLRLPMALMALVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLGAST
CCCHHHEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
VIAFGGFGLPSAFAALEISQQILFWLFGSLTKATWENLSIATVVTIVCVSLLAKDLWKLT
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALRLGEARALSLGINLQRLRLKTLVLVAIMTATAISFVGIIGFIGLVAPHVARMLLGEDQ
HHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RFFLPGAMLIGAAFLSVASVLSKVIVPGALFPVGIITSFVGVPFFFWIVLTKR
CEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]