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The map label for this gene is omlA [H]

Identifier: 126209212

GI number: 126209212

Start: 1984988

End: 1986091

Strand: Direct

Name: omlA [H]

Synonym: APL_1748

Alternate gene names: 126209212

Gene position: 1984988-1986091 (Clockwise)

Preceding gene: 126209211

Following gene: 126209215

Centisome position: 87.27

GC content: 35.6

Gene sequence:

>1104_bases
ATGAATATTGCAACAAAATTAATAGCCGGTTTAGTCGCAGGTTTAGTGCTTACCGCATGTAGTGGCGGCGGCTCATCGGG
TTCATCGCCTAAACCAAATTCGGAATCTACGCCTAAGGTTGATATGTCCGCACCAAAAGCGGAGCAGCCAAAAAAAGAGG
AAGCTCCGCAAGCGGATAGCCCGAAAGCAGAAAAACCAAAAAGTATTGCTCCACTGATGATGGAAAACCCAAAAGTAGAG
AAACAGAAAGAAAATAACCTACAAGAGAAAAGTCCAAAGGCAGACGAACCGCAAGTAATGGATCCAAAATTAGGTGCTCC
ACAAAAAGATGATCAGAAGTTAGAAGAACCTAAGAATAAAAGTAATGCGGAAATTCTTAAGGAATTAGGGATTAAGGATA
TTACTTCAGGGACAATTAGTATTTCCGATATTGAATTGAATCTACAATTAGATAGCAATGATAATGTGAAAATATCTTTG
TTAAATGAGAATTTAATGCGTGATAATTTAACGATTAATAATAAGATTGCAGGTTCGGATATTAGAACGTTAAAAGATTC
TTCAGGTAGATTGTTAGGTTATTATGGTTATGTGCAATTGAATCAAGTTACACAAGACTCTCGTGACCCAGATAATTATA
AGCATCAGTTTGAAAATCATTATTTACTGTCTATGAATGATGCTGAGAAAATATTACCAGAAAAGTCGTTAGAATATAAA
GGTAGTATGATTTACGGATATAATACTTCTGGAAATGAAAAGCTTACTGCAGAAGTGAATGCTAAATATGATAGTTCAAC
TAAAAAATTATCAATGAAAGTATATGATAATGATCGTTATTGGAAATTAGGCGAAGTAATGAGTAACAATGTTAGATTAC
CAGAAGAAAAAGTTGATGGTGTGAAAGTTGATTCTGACGGAACAATTAATGCTCGTTTATATTTAAGCACTGAAGAACCA
TTAAAATTAACCCCTGACGCCAATTTCTCCGGTGGTATTTTTGGGAAAAACGGTGAAGTACTGGCAGGAAAAGCGGAAAG
CATTAAGGGAGAATGGCAAGGCGTAATCGGTGCTACGGCAACAACAAAAGAAGATAAAAAATAA

Upstream 100 bases:

>100_bases
TTTGTTTGATGGTATTATATTTACTTATATTTATGATTTTTAGTTTTTATTGTAAATTAAAGTGTTTATTTATTGTATTT
TAAGTATAAGGAATTTTTTA

Downstream 100 bases:

>100_bases
ACGCTTTGCTTACCAAACTAAAAGCTATCCTTCGGGATAGCTTTTTTACTTTTTAATCAGTGCCAATAGTGCATCGGTAA
AAGATTCCGGGTTTTCATAA

Product: Outer membrane lipoprotein A precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNIATKLIAGLVAGLVLTACSGGGSSGSSPKPNSESTPKVDMSAPKAEQPKKEEAPQADSPKAEKPKSIAPLMMENPKVE
KQKENNLQEKSPKADEPQVMDPKLGAPQKDDQKLEEPKNKSNAEILKELGIKDITSGTISISDIELNLQLDSNDNVKISL
LNENLMRDNLTINNKIAGSDIRTLKDSSGRLLGYYGYVQLNQVTQDSRDPDNYKHQFENHYLLSMNDAEKILPEKSLEYK
GSMIYGYNTSGNEKLTAEVNAKYDSSTKKLSMKVYDNDRYWKLGEVMSNNVRLPEEKVDGVKVDSDGTINARLYLSTEEP
LKLTPDANFSGGIFGKNGEVLAGKAESIKGEWQGVIGATATTKEDKK

Sequences:

>Translated_367_residues
MNIATKLIAGLVAGLVLTACSGGGSSGSSPKPNSESTPKVDMSAPKAEQPKKEEAPQADSPKAEKPKSIAPLMMENPKVE
KQKENNLQEKSPKADEPQVMDPKLGAPQKDDQKLEEPKNKSNAEILKELGIKDITSGTISISDIELNLQLDSNDNVKISL
LNENLMRDNLTINNKIAGSDIRTLKDSSGRLLGYYGYVQLNQVTQDSRDPDNYKHQFENHYLLSMNDAEKILPEKSLEYK
GSMIYGYNTSGNEKLTAEVNAKYDSSTKKLSMKVYDNDRYWKLGEVMSNNVRLPEEKVDGVKVDSDGTINARLYLSTEEP
LKLTPDANFSGGIFGKNGEVLAGKAESIKGEWQGVIGATATTKEDKK
>Mature_367_residues
MNIATKLIAGLVAGLVLTACSGGGSSGSSPKPNSESTPKVDMSAPKAEQPKKEEAPQADSPKAEKPKSIAPLMMENPKVE
KQKENNLQEKSPKADEPQVMDPKLGAPQKDDQKLEEPKNKSNAEILKELGIKDITSGTISISDIELNLQLDSNDNVKISL
LNENLMRDNLTINNKIAGSDIRTLKDSSGRLLGYYGYVQLNQVTQDSRDPDNYKHQFENHYLLSMNDAEKILPEKSLEYK
GSMIYGYNTSGNEKLTAEVNAKYDSSTKKLSMKVYDNDRYWKLGEVMSNNVRLPEEKVDGVKVDSDGTINARLYLSTEEP
LKLTPDANFSGGIFGKNGEVLAGKAESIKGEWQGVIGATATTKEDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001677 [H]

Pfam domain/function: PF01298 Lipoprotein_5 [H]

EC number: NA

Molecular weight: Translated: 40218; Mature: 40218

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIATKLIAGLVAGLVLTACSGGGSSGSSPKPNSESTPKVDMSAPKAEQPKKEEAPQADS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCC
PKAEKPKSIAPLMMENPKVEKQKENNLQEKSPKADEPQVMDPKLGAPQKDDQKLEEPKNK
CCCCCCCCCCCHHCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
SNAEILKELGIKDITSGTISISDIELNLQLDSNDNVKISLLNENLMRDNLTINNKIAGSD
CHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCHHHCCCEECCEECCCH
IRTLKDSSGRLLGYYGYVQLNQVTQDSRDPDNYKHQFENHYLLSMNDAEKILPEKSLEYK
HHHHHCCCCCEEEEEEEEEEECHHCCCCCCHHHHHHHCCEEEEEECCHHHHCCCCCCCCC
GSMIYGYNTSGNEKLTAEVNAKYDSSTKKLSMKVYDNDRYWKLGEVMSNNVRLPEEKVDG
CCEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEHHHHHCCCCCCCHHHCCC
VKVDSDGTINARLYLSTEEPLKLTPDANFSGGIFGKNGEVLAGKAESIKGEWQGVIGATA
EEECCCCEEEEEEEECCCCCEEECCCCCCCCCEECCCCCEEECCHHHCCCCCCEEEECCC
TTKEDKK
CCCCCCC
>Mature Secondary Structure
MNIATKLIAGLVAGLVLTACSGGGSSGSSPKPNSESTPKVDMSAPKAEQPKKEEAPQADS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCC
PKAEKPKSIAPLMMENPKVEKQKENNLQEKSPKADEPQVMDPKLGAPQKDDQKLEEPKNK
CCCCCCCCCCCHHCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
SNAEILKELGIKDITSGTISISDIELNLQLDSNDNVKISLLNENLMRDNLTINNKIAGSD
CHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCHHHCCCEECCEECCCH
IRTLKDSSGRLLGYYGYVQLNQVTQDSRDPDNYKHQFENHYLLSMNDAEKILPEKSLEYK
HHHHHCCCCCEEEEEEEEEEECHHCCCCCCHHHHHHHCCEEEEEECCHHHHCCCCCCCCC
GSMIYGYNTSGNEKLTAEVNAKYDSSTKKLSMKVYDNDRYWKLGEVMSNNVRLPEEKVDG
CCEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEHHHHHCCCCCCCHHHCCC
VKVDSDGTINARLYLSTEEPLKLTPDANFSGGIFGKNGEVLAGKAESIKGEWQGVIGATA
EEECCCCEEEEEEEECCCCCEEECCCCCCCCCEECCCCCEEECCHHHCCCCCCEEEECCC
TTKEDKK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8423086 [H]