| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209198
Identifier: 126209198
GI number: 126209198
Start: 1970132
End: 1970911
Strand: Reverse
Name: 126209198
Synonym: APL_1734
Alternate gene names: NA
Gene position: 1970911-1970132 (Counterclockwise)
Preceding gene: 126209199
Following gene: 126209196
Centisome position: 86.65
GC content: 22.69
Gene sequence:
>780_bases ATGAAATACTTTTATATTTTATTAGTTCAATTTGTTTTTTTACTTTTATTCAATAACTCTCAAAAACAAGAATTTTATTT TGATGCTGCATTATGGTTAATATTAAACCTATTTGCACTATGCTATATTTTATACGATTTATTTTTAGATAAAAAACAAA TAAAAAGTATAAAGAGATTATATTCTATTATAACATCATCCATTGTCGTTACATTATTTACCTTATACTATAATTATCTT ATAGGCCTGCTTTATATAAATTACTTCGAAATAACAGGAATAAAGAACACTCTATTCATTAGTAATGGATTCTTATCTAA TACAATTATACTACTAACAACTATAATATTAATAAACATTTCCTTTTTATTATATATAATAATATCAATATTTATCCTAT TTTTCCTACAAGCCAGCATTATTCAAAAAGAAGGTCAAAAATATAGAAAAGCCATTATAACAGTTAGTTTAATTTTATCA TTTATTTCTATACTTATATCCAGCTTGCTCGTAGTAAAAAAATATGAGAATCCAGATAATATTGTTAAAGTAATAAAACA TTACTTATATGAATACCAATACTTTGATAATGAAACAAGCAAAGGAATTTATATTTGTAGAAACTTTGCAGATGTTAAAG GAAGTATATATCTAGAGAATAACTTATCTTCACGAGAAGACGATCAGATTAAAGTTTATCCTTTATTTTCGGAAGACAAA GCATCTTATGTACTAAAATATAATCAACAATATTCTTTTAAGATAGATAGTTGTATGTAG
Upstream 100 bases:
>100_bases TGAAGATTTAAGTCGTTTTATTCTTTAATTAACGGATAACAAGCGGTCAAAATTTGCGGATTTTTTGCAGATTTTGACCA CTTTTAATATACGAGAGAAA
Downstream 100 bases:
>100_bases TATAAAAGGATTTATCCCCTATGGTGAACTCACTTGATGAAGAGTTTTATTTGTACTTATATCTATCTTAATTGATTTAG CCTTACTCCCTAAGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKYFYILLVQFVFLLLFNNSQKQEFYFDAALWLILNLFALCYILYDLFLDKKQIKSIKRLYSIITSSIVVTLFTLYYNYL IGLLYINYFEITGIKNTLFISNGFLSNTIILLTTIILINISFLLYIIISIFILFFLQASIIQKEGQKYRKAIITVSLILS FISILISSLLVVKKYENPDNIVKVIKHYLYEYQYFDNETSKGIYICRNFADVKGSIYLENNLSSREDDQIKVYPLFSEDK ASYVLKYNQQYSFKIDSCM
Sequences:
>Translated_259_residues MKYFYILLVQFVFLLLFNNSQKQEFYFDAALWLILNLFALCYILYDLFLDKKQIKSIKRLYSIITSSIVVTLFTLYYNYL IGLLYINYFEITGIKNTLFISNGFLSNTIILLTTIILINISFLLYIIISIFILFFLQASIIQKEGQKYRKAIITVSLILS FISILISSLLVVKKYENPDNIVKVIKHYLYEYQYFDNETSKGIYICRNFADVKGSIYLENNLSSREDDQIKVYPLFSEDK ASYVLKYNQQYSFKIDSCM >Mature_259_residues MKYFYILLVQFVFLLLFNNSQKQEFYFDAALWLILNLFALCYILYDLFLDKKQIKSIKRLYSIITSSIVVTLFTLYYNYL IGLLYINYFEITGIKNTLFISNGFLSNTIILLTTIILINISFLLYIIISIFILFFLQASIIQKEGQKYRKAIITVSLILS FISILISSLLVVKKYENPDNIVKVIKHYLYEYQYFDNETSKGIYICRNFADVKGSIYLENNLSSREDDQIKVYPLFSEDK ASYVLKYNQQYSFKIDSCM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30608; Mature: 30608
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFYILLVQFVFLLLFNNSQKQEFYFDAALWLILNLFALCYILYDLFLDKKQIKSIKRL CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YSIITSSIVVTLFTLYYNYLIGLLYINYFEITGIKNTLFISNGFLSNTIILLTTIILINI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHH SFLLYIIISIFILFFLQASIIQKEGQKYRKAIITVSLILSFISILISSLLVVKKYENPDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IVKVIKHYLYEYQYFDNETSKGIYICRNFADVKGSIYLENNLSSREDDQIKVYPLFSEDK HHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCCEEEEECCCCCCCCCCEEEEEEECCCC ASYVLKYNQQYSFKIDSCM CCEEEEECCCEEEEECCCC >Mature Secondary Structure MKYFYILLVQFVFLLLFNNSQKQEFYFDAALWLILNLFALCYILYDLFLDKKQIKSIKRL CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YSIITSSIVVTLFTLYYNYLIGLLYINYFEITGIKNTLFISNGFLSNTIILLTTIILINI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHH SFLLYIIISIFILFFLQASIIQKEGQKYRKAIITVSLILSFISILISSLLVVKKYENPDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IVKVIKHYLYEYQYFDNETSKGIYICRNFADVKGSIYLENNLSSREDDQIKVYPLFSEDK HHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCCEEEEECCCCCCCCCCEEEEEEECCCC ASYVLKYNQQYSFKIDSCM CCEEEEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA