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The map label for this gene is 126209194

Identifier: 126209194

GI number: 126209194

Start: 1967877

End: 1968107

Strand: Direct

Name: 126209194

Synonym: APL_1730

Alternate gene names: NA

Gene position: 1967877-1968107 (Clockwise)

Preceding gene: 126209193

Following gene: 126209195

Centisome position: 86.52

GC content: 42.42

Gene sequence:

>231_bases
ATGGAAGCATCAGTATTTATGACAAACCGTAGTCAGGCGGTACGATTACCTGCAGAAGTGCGTTTTGCAAGTGATGTAAA
AAAACTTTCTGTAAGAGTGGTAGGCAATGAACGTATTTTGGCTCCAATTAACCAAAGTTGGGATAGCTTCTTTCTGAGTT
CGGCAACGGTAAGCGATGATTTCATGACAGAGCGTGAAATCAGCACTCAAGCCGAACGTGAGGAACTATAA

Upstream 100 bases:

>100_bases
CTGATTTCTGACTTTTCATTAAGTAAACAACACTTCTTTTGCTTTTATTTATGGGATATACTTTCAGTATATACTAATAT
TAGTTTTAAAGGAGAACAAA

Downstream 100 bases:

>100_bases
TGCTAACTTATATGCTTGATACTAACATTGCGATTTATGTGATTAAACGCAGACCTATTGAAGTGCTGGATAAGTTTAAT
TTAAATTCTACCCGTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MEASVFMTNRSQAVRLPAEVRFASDVKKLSVRVVGNERILAPINQSWDSFFLSSATVSDDFMTEREISTQAEREEL

Sequences:

>Translated_76_residues
MEASVFMTNRSQAVRLPAEVRFASDVKKLSVRVVGNERILAPINQSWDSFFLSSATVSDDFMTEREISTQAEREEL
>Mature_76_residues
MEASVFMTNRSQAVRLPAEVRFASDVKKLSVRVVGNERILAPINQSWDSFFLSSATVSDDFMTEREISTQAEREEL

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 8626; Mature: 8626

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASVFMTNRSQAVRLPAEVRFASDVKKLSVRVVGNERILAPINQSWDSFFLSSATVSDD
CCCEEEEECCCCEEECCCCCCHHHCCEEEEEEECCCCEEEECCCCCCCCEEECCCCCCCC
FMTEREISTQAEREEL
CCCCHHHCCCCCCCCC
>Mature Secondary Structure
MEASVFMTNRSQAVRLPAEVRFASDVKKLSVRVVGNERILAPINQSWDSFFLSSATVSDD
CCCEEEEECCCCEEECCCCCCHHHCCEEEEEEECCCCEEEECCCCCCCCEEECCCCCCCC
FMTEREISTQAEREEL
CCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]