| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209193
Identifier: 126209193
GI number: 126209193
Start: 1965725
End: 1967146
Strand: Direct
Name: 126209193
Synonym: APL_1729
Alternate gene names: NA
Gene position: 1965725-1967146 (Clockwise)
Preceding gene: 126209192
Following gene: 126209194
Centisome position: 86.43
GC content: 26.02
Gene sequence:
>1422_bases ATGTATTTAAATACCTCGTATAACTTACTTACACCAATATATTCATTACTTACAAAACCGTTTGACTTTTTTGCTTTGAA AAGTCTCAAAATATTGAAAAATAATCTGAAATACTATTATAGTGATTTGGAAATTGTGGCAAATATTTATGACGAAGAAA AGGATAGATTAAAGGCTAAGCTAGGCAATTTTTGTTATAAATCAGAATCATATTATAAGTGTCAGTTACTACTGGATAAT ACTTTAGTGGAAAGTTCTAAGAATTTATTAGATTTACACTCTATTCAAGTACAAATGGAACGTTTGTATGATTACTTTGG ATTGAAAAGAGAAGGGGGATCTGTATTAGATTTAAATGATCTTGAATATATAAGTGTTTTAAATTTTCTTAGAATTAATG AACTATTGTCATTATGTATTGCAGGTAAAATAAAAGTTAGAGTTTTTAATAAAAAAATAATATTCTCACCTGCAGATAGC TTCTCAAAAAAAGAATTTTATGCTACTTGGTTTTCTCGTTATATAGAAGCATCAAGTAATTTATCTACAATAAAACATAT TTTAGAATTATCAACCTTATTGAAAGGTAAAGTGAATGATGATGTTTTAGATTTCATTTTTGATAAGGTTTTTAGTATTA AATTTAGTGAAATACCTATAGCTGGACGTAATCTAGGATGTGTTAGATTGCTTGTGCTTAGTATAGAAATCATATTTTCA ATTCAGTATTACCTTATAGCTAATAAGACTAGTTACATTAGCATTGATGAGCTATTGGATAAATTTAATTTAAAAAAAGA AGATGTTGTACTTTTACTAGAATTACAGAAAAAACAGTTAGTATCAGAGCAATTTTTATTCGGAAAAGAAAGTGAGTTAA GGATAAATGTTACAACTTTTATAAAATGTATTAGAACGTTCTTTCATAAGCTTTCCGAAGAATTTAAAGAAGTAGATAAA AGAGAGTATTTGCTCGGTGGTAGATTTTTTGAGGAAAATAGTATAAAAAATAGAATGAGTAGTTTAAATTATCAACATCG TTATGTTGTATTTAATGGTATAAACAGAGGGGATATTAAGATAAAAAATGAATTAGATATTGAGTATATTATTTATGATA AAGAAGAAAAAAGATACTATTTTATTCAATCGAAATATTCAATTTTTGGGGAAAGAAGTTATTTTGAAGGGGAGGTAAAA CAAATTCAATCAGATATATCTAAAGGACTGAAGCAATTAAGATCCGCTAGAGATTTATTTGAACAAGGGAGGTTAGATCT CCATTTAAATAAGGTTGGGATAGAAAATGCTACGTTAGATAATAGTAGTTTTATTTTGTTACATAATATTCCTCAGTTAG ATTTTCAGATAACAAAAGATAAAATTGCTTTATATGATTGGAATACTCTCAGAAATTATTAA
Upstream 100 bases:
>100_bases GTTATTAAATGCGGGTGATGAAGAGTAATTCTTAGTATCGATAGAGAAAAGTAAAGCCTCCAGAACGAAAGTTCTGGGGG CTTTTTGTTAGGAATATTAT
Downstream 100 bases:
>100_bases AGAATGAGAGGGGTATTATAGAAGATGATGGTGTTTATAGCTTAGATAAAAATATCATGCTTGGTAATCCGCAAGTAGTA ATAAATAAATTATTATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MYLNTSYNLLTPIYSLLTKPFDFFALKSLKILKNNLKYYYSDLEIVANIYDEEKDRLKAKLGNFCYKSESYYKCQLLLDN TLVESSKNLLDLHSIQVQMERLYDYFGLKREGGSVLDLNDLEYISVLNFLRINELLSLCIAGKIKVRVFNKKIIFSPADS FSKKEFYATWFSRYIEASSNLSTIKHILELSTLLKGKVNDDVLDFIFDKVFSIKFSEIPIAGRNLGCVRLLVLSIEIIFS IQYYLIANKTSYISIDELLDKFNLKKEDVVLLLELQKKQLVSEQFLFGKESELRINVTTFIKCIRTFFHKLSEEFKEVDK REYLLGGRFFEENSIKNRMSSLNYQHRYVVFNGINRGDIKIKNELDIEYIIYDKEEKRYYFIQSKYSIFGERSYFEGEVK QIQSDISKGLKQLRSARDLFEQGRLDLHLNKVGIENATLDNSSFILLHNIPQLDFQITKDKIALYDWNTLRNY
Sequences:
>Translated_473_residues MYLNTSYNLLTPIYSLLTKPFDFFALKSLKILKNNLKYYYSDLEIVANIYDEEKDRLKAKLGNFCYKSESYYKCQLLLDN TLVESSKNLLDLHSIQVQMERLYDYFGLKREGGSVLDLNDLEYISVLNFLRINELLSLCIAGKIKVRVFNKKIIFSPADS FSKKEFYATWFSRYIEASSNLSTIKHILELSTLLKGKVNDDVLDFIFDKVFSIKFSEIPIAGRNLGCVRLLVLSIEIIFS IQYYLIANKTSYISIDELLDKFNLKKEDVVLLLELQKKQLVSEQFLFGKESELRINVTTFIKCIRTFFHKLSEEFKEVDK REYLLGGRFFEENSIKNRMSSLNYQHRYVVFNGINRGDIKIKNELDIEYIIYDKEEKRYYFIQSKYSIFGERSYFEGEVK QIQSDISKGLKQLRSARDLFEQGRLDLHLNKVGIENATLDNSSFILLHNIPQLDFQITKDKIALYDWNTLRNY >Mature_473_residues MYLNTSYNLLTPIYSLLTKPFDFFALKSLKILKNNLKYYYSDLEIVANIYDEEKDRLKAKLGNFCYKSESYYKCQLLLDN TLVESSKNLLDLHSIQVQMERLYDYFGLKREGGSVLDLNDLEYISVLNFLRINELLSLCIAGKIKVRVFNKKIIFSPADS FSKKEFYATWFSRYIEASSNLSTIKHILELSTLLKGKVNDDVLDFIFDKVFSIKFSEIPIAGRNLGCVRLLVLSIEIIFS IQYYLIANKTSYISIDELLDKFNLKKEDVVLLLELQKKQLVSEQFLFGKESELRINVTTFIKCIRTFFHKLSEEFKEVDK REYLLGGRFFEENSIKNRMSSLNYQHRYVVFNGINRGDIKIKNELDIEYIIYDKEEKRYYFIQSKYSIFGERSYFEGEVK QIQSDISKGLKQLRSARDLFEQGRLDLHLNKVGIENATLDNSSFILLHNIPQLDFQITKDKIALYDWNTLRNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55734; Mature: 55734
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNTSYNLLTPIYSLLTKPFDFFALKSLKILKNNLKYYYSDLEIVANIYDEEKDRLKAK CEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNFCYKSESYYKCQLLLDNTLVESSKNLLDLHSIQVQMERLYDYFGLKREGGSVLDLND HHHHHCCCCCCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHCEECCCCCEEECCC LEYISVLNFLRINELLSLCIAGKIKVRVFNKKIIFSPADSFSKKEFYATWFSRYIEASSN CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC LSTIKHILELSTLLKGKVNDDVLDFIFDKVFSIKFSEIPIAGRNLGCVRLLVLSIEIIFS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHE IQYYLIANKTSYISIDELLDKFNLKKEDVVLLLELQKKQLVSEQFLFGKESELRINVTTF EEEEEEECCCCEEEHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEHHHH IKCIRTFFHKLSEEFKEVDKREYLLGGRFFEENSIKNRMSSLNYQHRYVVFNGINRGDIK HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCEE IKNELDIEYIIYDKEEKRYYFIQSKYSIFGERSYFEGEVKQIQSDISKGLKQLRSARDLF EECCCCEEEEEEECCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EQGRLDLHLNKVGIENATLDNSSFILLHNIPQLDFQITKDKIALYDWNTLRNY HCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCEEEECCEEEEEECHHHCCC >Mature Secondary Structure MYLNTSYNLLTPIYSLLTKPFDFFALKSLKILKNNLKYYYSDLEIVANIYDEEKDRLKAK CEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNFCYKSESYYKCQLLLDNTLVESSKNLLDLHSIQVQMERLYDYFGLKREGGSVLDLND HHHHHCCCCCCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHCEECCCCCEEECCC LEYISVLNFLRINELLSLCIAGKIKVRVFNKKIIFSPADSFSKKEFYATWFSRYIEASSN CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC LSTIKHILELSTLLKGKVNDDVLDFIFDKVFSIKFSEIPIAGRNLGCVRLLVLSIEIIFS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHE IQYYLIANKTSYISIDELLDKFNLKKEDVVLLLELQKKQLVSEQFLFGKESELRINVTTF EEEEEEECCCCEEEHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEHHHH IKCIRTFFHKLSEEFKEVDKREYLLGGRFFEENSIKNRMSSLNYQHRYVVFNGINRGDIK HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCEE IKNELDIEYIIYDKEEKRYYFIQSKYSIFGERSYFEGEVKQIQSDISKGLKQLRSARDLF EECCCCEEEEEEECCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EQGRLDLHLNKVGIENATLDNSSFILLHNIPQLDFQITKDKIALYDWNTLRNY HCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCEEEECCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA