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The map label for this gene is ulaR [H]

Identifier: 126209166

GI number: 126209166

Start: 1934581

End: 1935327

Strand: Direct

Name: ulaR [H]

Synonym: APL_1702

Alternate gene names: 126209166

Gene position: 1934581-1935327 (Clockwise)

Preceding gene: 126209165

Following gene: 126209167

Centisome position: 85.06

GC content: 38.96

Gene sequence:

>747_bases
ATGAACGAAATTTTTAGACATAAAAAGCTATTAGCTGCGTTGGAAGCAAAGCAAATGCTCTCAACGCTAGAGATTATGCA
TTTACTTAACGTGTCGCCGGCGACTGCGAGACGCGATATTAATAAATTAAGCGAACAGAAAAAATTGCGCAAAGTACGTA
ACGGTGCGGAAGCGATCAACGTACAAAAATCTATTGAGCAAGATAAACCGATTAATAATTTCGATGAAAAACGTCGTATC
GCCGAGGCGGCGAGCAGACTTTGTCGAGAAGGAGACAGCGTTATCTTGACCTGCGGTTCGACCATGCAATTATTAGGGCA
GGCATTATGCGGTCAAAAATTGCAAATTATTACCAATTTCCTACCGCTTGCCAATTACCTGATTGAGCAACAACATGATG
ACGTTGTGATTATGGGCGGGCAGTATAATAAAAATAAAAAAGTTACGCTTTCGCTCAACCAACAGAATGAATTTATGTAT
GCCGCGAATATTATGTTTACCAGCGGTAAAGGATTTACGCCGGAAGGTTTATTTAAAACCGATATGATCATTGCCAATTC
CGAAGCGCAAATGTCATCAAAAGCAAGTAAATATGTCGTTTTGCTGGATAGTACCAAACTCGGTAAAGAAATCGGTATGT
TATTTAGAGATATAAATAATGTCGATTTGTTAATTACCGGTAAAGAAGCCGATCCTAACATTGTTCAATCGATTAGAGAT
AAAGGTGTAGAAATCATTCTTGCCTAG

Upstream 100 bases:

>100_bases
TGAAGGCGAGCCACTCTTAACGGAATTTTAAGAGTGGCTTATTTTTCAGTTCATTGTTCATGGTTTAAAATGGATGACTT
ATATAAGCAAGGACATGGTA

Downstream 100 bases:

>100_bases
CTTAACGATATATCGGAATATATAAACAAGCGGTTAAAAAGTTTTGTTTTTTTACTAAAAATATTACTCAAACCGGGGGA
TGAATATGAGAAAACATAAG

Product: transcriptional repressor UlaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNEIFRHKKLLAALEAKQMLSTLEIMHLLNVSPATARRDINKLSEQKKLRKVRNGAEAINVQKSIEQDKPINNFDEKRRI
AEAASRLCREGDSVILTCGSTMQLLGQALCGQKLQIITNFLPLANYLIEQQHDDVVIMGGQYNKNKKVTLSLNQQNEFMY
AANIMFTSGKGFTPEGLFKTDMIIANSEAQMSSKASKYVVLLDSTKLGKEIGMLFRDINNVDLLITGKEADPNIVQSIRD
KGVEIILA

Sequences:

>Translated_248_residues
MNEIFRHKKLLAALEAKQMLSTLEIMHLLNVSPATARRDINKLSEQKKLRKVRNGAEAINVQKSIEQDKPINNFDEKRRI
AEAASRLCREGDSVILTCGSTMQLLGQALCGQKLQIITNFLPLANYLIEQQHDDVVIMGGQYNKNKKVTLSLNQQNEFMY
AANIMFTSGKGFTPEGLFKTDMIIANSEAQMSSKASKYVVLLDSTKLGKEIGMLFRDINNVDLLITGKEADPNIVQSIRD
KGVEIILA
>Mature_248_residues
MNEIFRHKKLLAALEAKQMLSTLEIMHLLNVSPATARRDINKLSEQKKLRKVRNGAEAINVQKSIEQDKPINNFDEKRRI
AEAASRLCREGDSVILTCGSTMQLLGQALCGQKLQIITNFLPLANYLIEQQHDDVVIMGGQYNKNKKVTLSLNQQNEFMY
AANIMFTSGKGFTPEGLFKTDMIIANSEAQMSSKASKYVVLLDSTKLGKEIGMLFRDINNVDLLITGKEADPNIVQSIRD
KGVEIILA

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=251, Percent_Identity=52.5896414342629, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI87082344, Length=248, Percent_Identity=28.6290322580645, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789059, Length=252, Percent_Identity=26.1904761904762, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789829, Length=256, Percent_Identity=23.046875, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787540, Length=211, Percent_Identity=27.4881516587678, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27743; Mature: 27743

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIFRHKKLLAALEAKQMLSTLEIMHLLNVSPATARRDINKLSEQKKLRKVRNGAEAIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
VQKSIEQDKPINNFDEKRRIAEAASRLCREGDSVILTCGSTMQLLGQALCGQKLQIITNF
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHH
LPLANYLIEQQHDDVVIMGGQYNKNKKVTLSLNQQNEFMYAANIMFTSGKGFTPEGLFKT
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEE
DMIIANSEAQMSSKASKYVVLLDSTKLGKEIGMLFRDINNVDLLITGKEADPNIVQSIRD
EEEEECCHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
KGVEIILA
CCEEEEEC
>Mature Secondary Structure
MNEIFRHKKLLAALEAKQMLSTLEIMHLLNVSPATARRDINKLSEQKKLRKVRNGAEAIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
VQKSIEQDKPINNFDEKRRIAEAASRLCREGDSVILTCGSTMQLLGQALCGQKLQIITNF
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCHHHHHHHH
LPLANYLIEQQHDDVVIMGGQYNKNKKVTLSLNQQNEFMYAANIMFTSGKGFTPEGLFKT
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEE
DMIIANSEAQMSSKASKYVVLLDSTKLGKEIGMLFRDINNVDLLITGKEADPNIVQSIRD
EEEEECCHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
KGVEIILA
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA