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The map label for this gene is fliY [C]

Identifier: 126209121

GI number: 126209121

Start: 1884563

End: 1885345

Strand: Reverse

Name: fliY [C]

Synonym: APL_1657

Alternate gene names: 126209121

Gene position: 1885345-1884563 (Counterclockwise)

Preceding gene: 126209122

Following gene: 126209119

Centisome position: 82.89

GC content: 41.89

Gene sequence:

>783_bases
ATGTTAAAAAAATTATCTGTAATTGCGGTTTCAGCGATTGCATTAGCGACTTCAGCAACTTCATTAGCAAAAGAAACGTT
ACTCGAAAGAATCAATGCGAAAGGTACTATTACCGTTGGAACAGAGGGGACTTATGCACCTTTTACTTACCATGATGCGA
GCGGTAAATTAACCGGTTACGATGTGGAAGTTACGCGTGCTGTGGCGGAAAAACTCGGCGTTAAAGTGGATTTTAAAGAA
ACGCAATGGGATGCGATGTTAGCCGGTTTAAAAGCGGATCGTTTCGATTTAGTGGCAAATCAAGTGGGGTTAACCACTCC
GGAACGCCAAGCGACTTTTGATAAATCGGCCGCTTATAGTTGGTCAGGTGCGGCGTTAGTGGTACGAAATGACGAGCAAA
AAATCAAACAAGCCTCGGATGTGAAAGGTGTGAAAACCGCACAGACCTTAAGCTCAAACTACGGTGAATTAGCGCGTGCA
AACGGTGCGGATATTGTGCCGATTGACGGTATGGCGCAAGGTTTATTATTAATTCAACAAAAACGTGCGGATGCTACTTT
CAACGATAATCTAGCATTATTGGATTACCTCAAGAAAAATCCGAAATCAGGTCTTAAAATTGTTTGGGAATCCCCTGAAA
AAGTGGATGCCGGTTTTATTGCCAATAAAGGCAACCAAGAAGCATTAAACAAAATTAGTGCGGCAATTGGCGAATTACAT
AAAGACGGCACTCTAAAAAAATTAGGCGAACAATTCTTCGGTCGTGATATTAGCGTGAAATAA

Upstream 100 bases:

>100_bases
TTAGTTATTTGAAGCGGTTCTGAATTTCTCTAATAATGCGCAAAGACACAACTTCATATATTTTATCTATTAATTTTCTC
CAATTAAGAGGATTCCTACT

Downstream 100 bases:

>100_bases
TGAAATAAATAAAATGCCTCGTTATCAGCGAGGCATTATTTTTTATCATTTAGTTAAATATTTCATTTAATACGACTGCA
ATCCCGTCATCGTTATTGGA

Product: putative amino-acid ABC transporter-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGYDVEVTRAVAEKLGVKVDFKE
TQWDAMLAGLKADRFDLVANQVGLTTPERQATFDKSAAYSWSGAALVVRNDEQKIKQASDVKGVKTAQTLSSNYGELARA
NGADIVPIDGMAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDAGFIANKGNQEALNKISAAIGELH
KDGTLKKLGEQFFGRDISVK

Sequences:

>Translated_260_residues
MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGYDVEVTRAVAEKLGVKVDFKE
TQWDAMLAGLKADRFDLVANQVGLTTPERQATFDKSAAYSWSGAALVVRNDEQKIKQASDVKGVKTAQTLSSNYGELARA
NGADIVPIDGMAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDAGFIANKGNQEALNKISAAIGELH
KDGTLKKLGEQFFGRDISVK
>Mature_260_residues
MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGYDVEVTRAVAEKLGVKVDFKE
TQWDAMLAGLKADRFDLVANQVGLTTPERQATFDKSAAYSWSGAALVVRNDEQKIKQASDVKGVKTAQTLSSNYGELARA
NGADIVPIDGMAQGLLLIQQKRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDAGFIANKGNQEALNKISAAIGELH
KDGTLKKLGEQFFGRDISVK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=39.3129770992366, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1787088, Length=225, Percent_Identity=26.2222222222222, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=22.3214285714286, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787031, Length=255, Percent_Identity=23.921568627451, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788649, Length=265, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 27949; Mature: 27949

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEECC
DVEVTRAVAEKLGVKVDFKETQWDAMLAGLKADRFDLVANQVGLTTPERQATFDKSAAYS
CHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCC
WSGAALVVRNDEQKIKQASDVKGVKTAQTLSSNYGELARANGADIVPIDGMAQGLLLIQQ
CCCEEEEEECCHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCEEECCCHHHHHHHEEH
KRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDAGFIANKGNQEALNKISAAIGELH
HCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHC
KDGTLKKLGEQFFGRDISVK
CCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKKLSVIAVSAIALATSATSLAKETLLERINAKGTITVGTEGTYAPFTYHDASGKLTGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCEECC
DVEVTRAVAEKLGVKVDFKETQWDAMLAGLKADRFDLVANQVGLTTPERQATFDKSAAYS
CHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCC
WSGAALVVRNDEQKIKQASDVKGVKTAQTLSSNYGELARANGADIVPIDGMAQGLLLIQQ
CCCEEEEEECCHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCEEECCCHHHHHHHEEH
KRADATFNDNLALLDYLKKNPKSGLKIVWESPEKVDAGFIANKGNQEALNKISAAIGELH
HCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHC
KDGTLKKLGEQFFGRDISVK
CCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]