Click here to switch to the map view.

The map label for this gene is cbiQ

Identifier: 126209085

GI number: 126209085

Start: 1845340

End: 1845957

Strand: Reverse

Name: cbiQ

Synonym: APL_1621

Alternate gene names: NA

Gene position: 1845957-1845340 (Counterclockwise)

Preceding gene: 126209086

Following gene: 126209084

Centisome position: 81.16

GC content: 40.61

Gene sequence:

>618_bases
ATGACGGTATTATTGCAACCACATTGGCGTTTAATTTATATCTTTGTCGCAGGGTTAGCGATTAGTGCGCTGCATTCCGT
AAATCTTTTATTTATTCTGACCGCTTGCACGGCGATTTTGCTGATCGGGTTGCATTTTTACGCGCAGTATTCGCTGAAAA
CCTTGTGTCTTCGTTGGCTGAAGTTTAATCTTTTCACATTACTGATATTGCTTACTTTGAGTTGGCATATAGGTTCAAAC
GGCATCGAATGGCATCAAAAAGGGTTTGAGCTGGCGTTATTAATCGGCTTACGTATGAATTTAATTGTCTTGGTAATGTG
GCTGGGGCTATTTAATATAACGGATACCGTTTTAGTACAGGCAATCGGTAAATTGCCGTTACCAAGCAAGTTTATTCATC
TCTTTGTATTGACGATACGCTATATCGCATTATTATCCGAACTGAACGGTAAAATGGATATGGCGATGCGCGCCCGAGGC
TATCAGCCGAAATGCAATATGAGAACCTTGATGATTATCGCCCAAAAGGTATCGTTATTATTGATTCATGCGATGGTAAG
GGCGGAAAAAGCCGAAATCGCTTTAAAAGCCCGCGGATTTAAATTTGGTGAAAAATAG

Upstream 100 bases:

>100_bases
TCATTTACCTATTTTTGTTGTCGATAGTATCGTAAGCGTGGGGGTTGTATTGACGCTCACCAAAATGATGCCTTCCGCCT
TACATTTCGATTAATTAGTC

Downstream 100 bases:

>100_bases
CCCTGCAAATAAGAATACATAAATGAATATACTGACAGTCCGCAATCTTACTATTTGCCGTAATCAACAGCCTATTATCG
AAAACCTCAGTTTTACCCTC

Product: putative ABC transport permease protein CbiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTVLLQPHWRLIYIFVAGLAISALHSVNLLFILTACTAILLIGLHFYAQYSLKTLCLRWLKFNLFTLLILLTLSWHIGSN
GIEWHQKGFELALLIGLRMNLIVLVMWLGLFNITDTVLVQAIGKLPLPSKFIHLFVLTIRYIALLSELNGKMDMAMRARG
YQPKCNMRTLMIIAQKVSLLLIHAMVRAEKAEIALKARGFKFGEK

Sequences:

>Translated_205_residues
MTVLLQPHWRLIYIFVAGLAISALHSVNLLFILTACTAILLIGLHFYAQYSLKTLCLRWLKFNLFTLLILLTLSWHIGSN
GIEWHQKGFELALLIGLRMNLIVLVMWLGLFNITDTVLVQAIGKLPLPSKFIHLFVLTIRYIALLSELNGKMDMAMRARG
YQPKCNMRTLMIIAQKVSLLLIHAMVRAEKAEIALKARGFKFGEK
>Mature_204_residues
TVLLQPHWRLIYIFVAGLAISALHSVNLLFILTACTAILLIGLHFYAQYSLKTLCLRWLKFNLFTLLILLTLSWHIGSNG
IEWHQKGFELALLIGLRMNLIVLVMWLGLFNITDTVLVQAIGKLPLPSKFIHLFVLTIRYIALLSELNGKMDMAMRARGY
QPKCNMRTLMIIAQKVSLLLIHAMVRAEKAEIALKARGFKFGEK

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23347; Mature: 23216

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLQPHWRLIYIFVAGLAISALHSVNLLFILTACTAILLIGLHFYAQYSLKTLCLRWL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNLFTLLILLTLSWHIGSNGIEWHQKGFELALLIGLRMNLIVLVMWLGLFNITDTVLVQ
HHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGKLPLPSKFIHLFVLTIRYIALLSELNGKMDMAMRARGYQPKCNMRTLMIIAQKVSLL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LIHAMVRAEKAEIALKARGFKFGEK
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TVLLQPHWRLIYIFVAGLAISALHSVNLLFILTACTAILLIGLHFYAQYSLKTLCLRWL
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNLFTLLILLTLSWHIGSNGIEWHQKGFELALLIGLRMNLIVLVMWLGLFNITDTVLVQ
HHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGKLPLPSKFIHLFVLTIRYIALLSELNGKMDMAMRARGYQPKCNMRTLMIIAQKVSLL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LIHAMVRAEKAEIALKARGFKFGEK
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]