| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is utp
Identifier: 126209083
GI number: 126209083
Start: 1843761
End: 1844576
Strand: Reverse
Name: utp
Synonym: APL_1619
Alternate gene names: NA
Gene position: 1844576-1843761 (Counterclockwise)
Preceding gene: 126209084
Following gene: 126209082
Centisome position: 81.1
GC content: 42.89
Gene sequence:
>816_bases ATGTTTTTTAGTCATTGGACGCTCGGTGTGGGGTGTTTTCTCGGTGCATTAATCGGCACATATACGGCATCTTTGCTTAA ATATCCTCAACGGCAGATTGAACAGGGATTATACGGTTTTAATGCCAGTCTTGCGTTTATGTGTGTGATGTTTACTTTCG GCTTAGTGGATGCAAGCAATCCGATGATTTGGCTAAACGCGGTATCGGCGTCTATCGTAGCAACCCTGATTATGCGAGAA TTTACCAAACGGAATAAAATCGCTTTTACTTTCCCCTTCGTATTTACCTGCTGGATTTTTTGTGGGGCTATTGCTAAATA TCATTTCTTTGATCTCTCTCAGACCACACCCGCATTAGCGGATAATACGAATACGCTACAGGCAATCGGCGAGCCGTTTT ACGTTTGGGCGGAAGTCAATTTCGGCTCCAGTATCATTACCGGTATTTTACTTTTTCTTGCCATCTCGATTAATTCTCCG ATGGCTGCCATGTACGGTTTAGCCGCCGCAACCATAGGCACTTCCTTTGCCAACCAGTTATTAACCGTTCAACCGAACCA ACTCGCAAACGGTATTTACGGTTTCTCTCCGATTCTCGTCGCTTGCGCTTTTGCCGGCGATCGTTTCCGTAACTTTGTTT ATATTATTTTAGGATCGCTGTTAGCGGTCTTAATCCAATTTAGTATTTCAAGTTTAGGCATACCGAGTTATACCATCGGT TTTATTATCGCCAGTTGGTTATTATTGGCGGTTAAATCCAAGCTGGATAAAGCCGCTTTCGATAAAAACAAATTAGTCAG ATTGCTGAATCCTTAG
Upstream 100 bases:
>100_bases GTGGTGCAAACACACGGGAATGAAAAATGAAGCTGCTTAAATCCACCCTTACCGGGGTAGGGCAAATCTTTTTACAAGAA AACGGGTGATCGTCATCGCC
Downstream 100 bases:
>100_bases TCAAAACGGTCATAAGCAAGCGGTCTATTTTCAGAAAAATTTTACAAACACAAACAAAAAGAAGGTACAAAATGCATTTA ACTTCAAGAGAACAAGAAAA
Product: urea transport protein ApUT
Products: NA
Alternate protein names: Urea Transport Protein ApUT
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MFFSHWTLGVGCFLGALIGTYTASLLKYPQRQIEQGLYGFNASLAFMCVMFTFGLVDASNPMIWLNAVSASIVATLIMRE FTKRNKIAFTFPFVFTCWIFCGAIAKYHFFDLSQTTPALADNTNTLQAIGEPFYVWAEVNFGSSIITGILLFLAISINSP MAAMYGLAAATIGTSFANQLLTVQPNQLANGIYGFSPILVACAFAGDRFRNFVYIILGSLLAVLIQFSISSLGIPSYTIG FIIASWLLLAVKSKLDKAAFDKNKLVRLLNP
Sequences:
>Translated_271_residues MFFSHWTLGVGCFLGALIGTYTASLLKYPQRQIEQGLYGFNASLAFMCVMFTFGLVDASNPMIWLNAVSASIVATLIMRE FTKRNKIAFTFPFVFTCWIFCGAIAKYHFFDLSQTTPALADNTNTLQAIGEPFYVWAEVNFGSSIITGILLFLAISINSP MAAMYGLAAATIGTSFANQLLTVQPNQLANGIYGFSPILVACAFAGDRFRNFVYIILGSLLAVLIQFSISSLGIPSYTIG FIIASWLLLAVKSKLDKAAFDKNKLVRLLNP >Mature_271_residues MFFSHWTLGVGCFLGALIGTYTASLLKYPQRQIEQGLYGFNASLAFMCVMFTFGLVDASNPMIWLNAVSASIVATLIMRE FTKRNKIAFTFPFVFTCWIFCGAIAKYHFFDLSQTTPALADNTNTLQAIGEPFYVWAEVNFGSSIITGILLFLAISINSP MAAMYGLAAATIGTSFANQLLTVQPNQLANGIYGFSPILVACAFAGDRFRNFVYIILGSLLAVLIQFSISSLGIPSYTIG FIIASWLLLAVKSKLDKAAFDKNKLVRLLNP
Specific function: Unknown
COG id: COG4413
COG function: function code E; Urea transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29671; Mature: 29671
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSHWTLGVGCFLGALIGTYTASLLKYPQRQIEQGLYGFNASLAFMCVMFTFGLVDASN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PMIWLNAVSASIVATLIMREFTKRNKIAFTFPFVFTCWIFCGAIAKYHFFDLSQTTPALA CEEEEHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DNTNTLQAIGEPFYVWAEVNFGSSIITGILLFLAISINSPMAAMYGLAAATIGTSFANQL CCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCE LTVQPNQLANGIYGFSPILVACAFAGDRFRNFVYIILGSLLAVLIQFSISSLGIPSYTIG EEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FIIASWLLLAVKSKLDKAAFDKNKLVRLLNP HHHHHHHHHHHHHHHHHHHCCHHHHHEECCC >Mature Secondary Structure MFFSHWTLGVGCFLGALIGTYTASLLKYPQRQIEQGLYGFNASLAFMCVMFTFGLVDASN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PMIWLNAVSASIVATLIMREFTKRNKIAFTFPFVFTCWIFCGAIAKYHFFDLSQTTPALA CEEEEHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DNTNTLQAIGEPFYVWAEVNFGSSIITGILLFLAISINSPMAAMYGLAAATIGTSFANQL CCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCE LTVQPNQLANGIYGFSPILVACAFAGDRFRNFVYIILGSLLAVLIQFSISSLGIPSYTIG EEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FIIASWLLLAVKSKLDKAAFDKNKLVRLLNP HHHHHHHHHHHHHHHHHHHCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA