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The map label for this gene is ytfE [C]

Identifier: 126209070

GI number: 126209070

Start: 1834920

End: 1835414

Strand: Direct

Name: ytfE [C]

Synonym: APL_1606

Alternate gene names: 126209070

Gene position: 1834920-1835414 (Clockwise)

Preceding gene: 126209056

Following gene: 126209089

Centisome position: 80.67

GC content: 43.23

Gene sequence:

>495_bases
ATGTCCGTTTTAACTGATAAAGATTGGCGTACTGCACCGCTTGGCGAAATTATTGATTTTATTATCCCTCGTTTTCACGA
TACACATCGCAATCAATTGCCAACGCTGATTGAATTGGCGGAAAAAGTGGAATCCGTTCACGCAGATAGTGCTGATTGCC
CGAAAGGTTTAGCGGAACTTATTCGTAAAGTTTATGCGGATTTAGTGAATCATATGATGAAGGAAGAACAAATTCTGTTC
CCATTGATTAAAGCCGGCAGAGGAAAAATGGCGGCGGCACCGATTTCCGTGATGGAAGCCGAACACGATGAAGCCGGTAA
CGATGTCGAAGAGATACAAAAACTAACGAATAATTTCACCCTGCCTGAAGGTGCTTGCACTTCATGGCGCAATTTATATC
AAGGCTTACAAGAATTTGCCGCCGATTTAGATGCGCACGTAGATTTGGAAAATAATAATTTATTCCCTCGTGCGTTAGCC
GGCGACCAGCCTTAA

Upstream 100 bases:

>100_bases
ATTTAGGTCTAATCGCTACCCCGTCTTGATTATAGAGCTACTAAATTTCCAAATTTATAATTCCGACTAATTTAATCAAT
TATATTATTAGGAGTTTACG

Downstream 100 bases:

>100_bases
GCAAAAACAAGCGGTTGATTTTGAAGAAAAATTTGCAAAATTCTTCCGAAAATCAACCGCTTGTATCACACTCGCAAATT
AGGCGGATGCCTTTGAGAAC

Product: regulator of cell morphogenesis and NO signaling

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSVLTDKDWRTAPLGEIIDFIIPRFHDTHRNQLPTLIELAEKVESVHADSADCPKGLAELIRKVYADLVNHMMKEEQILF
PLIKAGRGKMAAAPISVMEAEHDEAGNDVEEIQKLTNNFTLPEGACTSWRNLYQGLQEFAADLDAHVDLENNNLFPRALA
GDQP

Sequences:

>Translated_164_residues
MSVLTDKDWRTAPLGEIIDFIIPRFHDTHRNQLPTLIELAEKVESVHADSADCPKGLAELIRKVYADLVNHMMKEEQILF
PLIKAGRGKMAAAPISVMEAEHDEAGNDVEEIQKLTNNFTLPEGACTSWRNLYQGLQEFAADLDAHVDLENNNLFPRALA
GDQP
>Mature_163_residues
SVLTDKDWRTAPLGEIIDFIIPRFHDTHRNQLPTLIELAEKVESVHADSADCPKGLAELIRKVYADLVNHMMKEEQILFP
LIKAGRGKMAAAPISVMEAEHDEAGNDVEEIQKLTNNFTLPEGACTSWRNLYQGLQEFAADLDAHVDLENNNLFPRALAG
DQP

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=157, Percent_Identity=59.2356687898089, Blast_Score=194, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 18347; Mature: 18216

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTDKDWRTAPLGEIIDFIIPRFHDTHRNQLPTLIELAEKVESVHADSADCPKGLAEL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IRKVYADLVNHMMKEEQILFPLIKAGRGKMAAAPISVMEAEHDEAGNDVEEIQKLTNNFT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
LPEGACTSWRNLYQGLQEFAADLDAHVDLENNNLFPRALAGDQP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVLTDKDWRTAPLGEIIDFIIPRFHDTHRNQLPTLIELAEKVESVHADSADCPKGLAEL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IRKVYADLVNHMMKEEQILFPLIKAGRGKMAAAPISVMEAEHDEAGNDVEEIQKLTNNFT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
LPEGACTSWRNLYQGLQEFAADLDAHVDLENNNLFPRALAGDQP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA